Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_N13
(885 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 169 5e-43
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 49 8e-07
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 48 2e-06
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 45 2e-05
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 42 9e-05
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 42 1e-04
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 38 0.001
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 38 0.003
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 37 0.003
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 37 0.003
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 37 0.004
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 36 0.006
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 36 0.006
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 35 0.013
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 33 0.054
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 33 0.071
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 30 0.38
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.38
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 29 0.88
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 29 0.88
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 1.2
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 29 1.2
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 28 2.0
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 28 2.0
SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces po... 28 2.0
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 27 2.7
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 3.6
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 4.7
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 27 4.7
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 26 6.2
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 26 8.2
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 8.2
SPAC4A8.07c |||sphingoid long chain base |Schizosaccharomyces po... 26 8.2
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 169 bits (411), Expect = 5e-43
Identities = 77/214 (35%), Positives = 127/214 (59%), Gaps = 1/214 (0%)
Frame = +3
Query: 111 FQNLLGTVYRKGXVLFSKXGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTAVDIAPN 290
F NL+GT++ KG ++F+ G ++SPVGNR+++YNLK N S T FE+H N + + ++P
Sbjct: 7 FSNLVGTIFSKGNLVFTPDGFSILSPVGNRVSVYNLKDNTSYTFPFENHKNISHIALSPT 66
Query: 291 GMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPV 470
LL+V E+G + + VLH + FK V A++FSP+GK+FAV + V P
Sbjct: 67 STLLLSVDEEGRCILCNFLRRSVLHYFNFKSPVGAIEFSPNGKFFAVSLGKLIQVWRTPN 126
Query: 471 HF-TGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSL 647
E+ PF++ R + D++ + WS+ SR SKD T ++H+V+ +E +L
Sbjct: 127 SLEEREFAPFVLHREYTGHFDDIVSISWSADSRFFISTSKDLTARLHSVDPIEGFHPCAL 186
Query: 648 SGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 749
+GH + ++ FF + + TVS++G L +W+ S
Sbjct: 187 TGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYS 220
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/72 (20%), Positives = 34/72 (47%)
Frame = +3
Query: 528 DEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLI 707
D ++ L +SS + + G+ D K+ + + + + HT + G+ F ++ L
Sbjct: 340 DALSTLQYSSDGQRIITGADDGKIKVWDMN--SGFCIVTFTQHTSAVSGLCFSKRGNVLF 397
Query: 708 TVSRNGQLCLWE 743
+ S +G + W+
Sbjct: 398 SSSLDGSVRAWD 409
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 49.2 bits (112), Expect = 8e-07
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Frame = +3
Query: 357 VLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALD-E 533
+LH + + V+FS DGK+ A C+ V TG+ + + K+ D
Sbjct: 280 LLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVE---TGKLITLLQEESSKREGDLY 336
Query: 534 VTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITV 713
V + +S + LA G +D +I + + L+GH +I + F + L++
Sbjct: 337 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRL--LTGHEQEIYSLDFSKDGKTLVSG 394
Query: 714 SRNGQLCLWEASIDADXLAVKQDD 785
S + +CLW+ L + DD
Sbjct: 395 SGDRTVCLWDVEAGEQKLILHTDD 418
Score = 44.0 bits (99), Expect = 3e-05
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Frame = +3
Query: 156 FSKXGNCVISPVGNR-ITIYNLKQNKSNTLSFESHYNYTAVDIAPNGMTLLAVTEKGEAQ 332
FSK G ++S G+R + +++++ + L + T V +P+G + A + +
Sbjct: 384 FSKDGKTLVSGSGDRTVCLWDVEAGEQK-LILHTDDGVTTVMFSPDGQFIAAGSLDKVIR 442
Query: 333 IISLTTSVVLHKYKFKQQVNAVKFSPDGKYF-AVCCDNTV----FVMTAPVHFTGEYRPF 497
I + + ++V + ++ V +V FSPDGKY + DNT+ + V +
Sbjct: 443 IWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGG 502
Query: 498 IMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGV 677
I K+ F D + + S + + GSKD T + + + + +L GH + +I V
Sbjct: 503 ICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPD--SPHSQLTLQGHNNSVISV 560
Score = 34.7 bits (76), Expect = 0.018
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 8/206 (3%)
Frame = +3
Query: 150 VLFSKXGNCVISPVGNRITIYNLKQNKSNTL------SFESHYNYTAVDIAPNGMTLLAV 311
V FS G + + ++N++ K TL E +V +P+G L
Sbjct: 293 VRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATG 352
Query: 312 TEKGEAQIISLTTSVVLHKYK-FKQQVNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGE 485
E + +I + V +Q++ ++ FS DGK D TV + GE
Sbjct: 353 VEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEA---GE 409
Query: 486 YRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDK 665
+++ D VT + +S + +A GS D +I T + L GH +
Sbjct: 410 ------QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSS---GTLVEQLHGHEES 460
Query: 666 IIGVFFERKSLDLITVSRNGQLCLWE 743
+ V F L++ S + + LWE
Sbjct: 461 VYSVAFSPDGKYLVSGSLDNTIKLWE 486
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 48.0 bits (109), Expect = 2e-06
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Frame = +3
Query: 282 APNGMTLLAVTEKGEAQIISLTTSVVLHKYK-FKQQVNAVKFSPDGKYFAVCCDNTVFVM 458
+P+ LL+ +E A++ S+ T L YK V V F P G YFA +
Sbjct: 388 SPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHD----Q 443
Query: 459 TAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITM 638
TA + P RVF L +V C+ + S + GS D T ++ V ++ +
Sbjct: 444 TAQLWSCDHIYPL---RVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRV 500
Query: 639 YSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWE 743
+ +GHT + V + + G + LW+
Sbjct: 501 F--NGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 44.8 bits (101), Expect = 2e-05
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 1/158 (0%)
Frame = +3
Query: 273 VDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYK-FKQQVNAVKFSPDGKYFAVCCDNTV 449
V I+P +L+ +E G ++ S T + KY + V+FSP G YFA +
Sbjct: 409 VSISPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHD-- 466
Query: 450 FVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLEN 629
TA + P RVF ++V C+ + + LA GS D TT++ V
Sbjct: 467 --QTARLWDVEHAAPL---RVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGT 521
Query: 630 ITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWE 743
+ ++ + H + + L L + +G + +W+
Sbjct: 522 VRVF--NAHHSPVSALCMSADGLSLASADESGIIKVWD 557
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Frame = +3
Query: 492 PFIMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTV----------EYLENITMY 641
P + L V C +S + + A+G D++ +++ E +
Sbjct: 338 PSVFMYTMHNTLSAVNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKS 397
Query: 642 SLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 740
SL GHT + GV + +++ S +G LW
Sbjct: 398 SLIGHTRPVFGVSISPQKEFILSCSEDGFTRLW 430
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 42.3 bits (95), Expect = 9e-05
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Frame = +3
Query: 369 YKF-KQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCL 545
Y F K +N FSPD +Y A+ + + F E+ + VF +TC+
Sbjct: 318 YAFSKSPINGFCFSPDYQYLALVSERGTLKL---FDFVKEH----VLDVFHSYFAGLTCV 370
Query: 546 DWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLD-----LIT 710
WS + +A+G KD I++ + + GH + V F+ D + +
Sbjct: 371 TWSPDGKFIAIGGKDDLVSIYSFPLRKLVA--RCQGHKSWVTDVIFDAWRCDDDNYRIAS 428
Query: 711 VSRNGQLCLWEASIDA 758
V + +L LW+ S+ A
Sbjct: 429 VGLDRKLLLWDFSVSA 444
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 41.9 bits (94), Expect = 1e-04
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = +3
Query: 375 FKQQVNAVKFSPDGKYFAV-CCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 551
F V AVK SPDG++ A DNTV V++ + F+ ++ L V +D
Sbjct: 533 FTDDVLAVKISPDGRFVAASLLDNTV-----KVYYLDSLKFFL--NLYGHKL-PVLSMDI 584
Query: 552 SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQL 731
S S+LL S D KI +++ + S+ H D I+ V F+ + + T S++ ++
Sbjct: 585 SYDSKLLVTCSADKNVKIWGLDFGD--CHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREV 642
Query: 732 CLWE 743
W+
Sbjct: 643 RYWD 646
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/77 (25%), Positives = 38/77 (49%)
Frame = +3
Query: 513 FKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERK 692
F+ LD V C+ + ++ GSKD T + V +Y L GH+ ++ + F R+
Sbjct: 217 FRATLDSVYCVQYDD--EIMVSGSKDRTVSVWDVN--SRFILYKLYGHSGSVLCLDFCRR 272
Query: 693 SLDLITVSRNGQLCLWE 743
L++ S + + +W+
Sbjct: 273 RNLLVSGSSDSTIIIWD 289
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 37.5 bits (83), Expect = 0.003
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Frame = +3
Query: 345 TTSVVLHKYKFKQQVNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKK 521
+T + + ++ VN FSPDG+ A D++V + TG++ + V
Sbjct: 378 STKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGK---TGKFLATLRGHVAA- 433
Query: 522 ALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGV 677
V WS+ SRLL S+DTT K+ V + L GH D++ V
Sbjct: 434 ----VYQCAWSTDSRLLVSSSQDTTLKVWDVR--SKKMKFDLPGHEDQVFAV 479
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +3
Query: 567 LLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEA 746
LLA GSKD T +I V+ +++LSGHT I V + ++ + + S + + +W+A
Sbjct: 241 LLASGSKDNTVRIWNVKL--RTLLFTLSGHTAPITCVRWGGQNW-IYSSSYDKTIRIWDA 297
Query: 747 SIDADXLAVKQDDTSRXKRVRXXNEGNLK 833
D L + + +R + E L+
Sbjct: 298 K-DGKCLHILKGHAARVNHLSLSTEHVLR 325
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.1 bits (82), Expect = 0.003
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +3
Query: 381 QQVNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSS 557
+ VNA++ S DG+ A D T+ + + TGE + V + V ++
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLWDSS---TGE-----VVGVLRGHRRGVWACSFNP 517
Query: 558 CSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCL 737
SR LA GS D T +I V+ + + +L GHT I+ + + + +++ + +G + +
Sbjct: 518 FSRQLASGSGDRTIRIWNVDTQQCVQ--TLEGHTGAILKLIYISQGTQVVSAAADGLVKV 575
Query: 738 WEAS 749
W S
Sbjct: 576 WSLS 579
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 37.1 bits (82), Expect = 0.003
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 510 VFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFER 689
VF DEV + +S R LA SKD T I V L+ + + L GH D + + +
Sbjct: 208 VFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRV--FRLIGHIDTVAYIRWSP 265
Query: 690 KSLDLITVSRNGQLCLWEA 746
L++ S + + LW+A
Sbjct: 266 DDRYLLSCSCDKSVILWDA 284
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 36.7 bits (81), Expect = 0.004
Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Frame = +3
Query: 156 FSKXGNCVISPVGNRIT-IYNLKQNKSNTLSFESHYNYTAVDIAPNGMTLLAVTEKGEAQ 332
FS G ++S G+R +++++ + L E TA+ I+PN + + +
Sbjct: 410 FSHNGRFIVSGSGDRTARLWDVETGQC-ILKLEIENGVTAIAISPNDQFIAVGSLDQIIR 468
Query: 333 IISLTTSVVLHKYKFKQQVNAVKFSPDGK-YFAVCCDNTVFV----MTAPVHFTGEYRPF 497
+ S++ ++V K+ V ++ FSPD + D T+ V T V +
Sbjct: 469 VWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEG 528
Query: 498 IMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGV 677
I K + D V + S SR GSKD + + ++ + + GH + +I V
Sbjct: 529 ICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQ--TGQSYLTCQGHKNSVISV 586
Query: 678 FFERKSLDLITVSRNGQLCLWEASID 755
F + S + + +W SID
Sbjct: 587 CFSPDGRQFASGSGDLRARIW--SID 610
Score = 33.1 bits (72), Expect = 0.054
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Frame = +3
Query: 357 VLHKYKFKQQVNAVKFSPDGKYFAVCCD---NTVFVMTAPVHFT-GEYRPFIMKRVFKKA 524
++H + V VKFS +GKY A C+ N V T FT E P + ++
Sbjct: 306 LVHTLEHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLY--- 362
Query: 525 LDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDL 704
V + +S + L G++D K+ + + Y SGH I + F +
Sbjct: 363 ---VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQK--VRYVFSGHEQDIYSLDFSHNGRFI 417
Query: 705 ITVSRNGQLCLWE 743
++ S + LW+
Sbjct: 418 VSGSGDRTARLWD 430
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 36.3 bits (80), Expect = 0.006
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 378 KQQVNAVKFSPDGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWS 554
+ +V + +S +G Y A C D +V++ A E F V ++ +V + W
Sbjct: 378 ENEVKCIAWSCNGNYLATCSRDKSVWIWEAT-----EDDEFDCLAVLQEHTQDVKVVTWH 432
Query: 555 SCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLC 734
LL GS D + + + L GHT+ + + F L + +G +
Sbjct: 433 PTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWALAFSPNGNTLASADNDGNVF 492
Query: 735 LW 740
LW
Sbjct: 493 LW 494
Score = 32.3 bits (70), Expect = 0.094
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 549 WSSCSR-LLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNG 725
W R +LAV S D+ I+ + +L GH +++ + + L T SR+
Sbjct: 341 WRPIERPVLAVASFDSVVSINEKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRDK 400
Query: 726 QLCLWEASID--ADXLAVKQDDTSRXKRV 806
+ +WEA+ D D LAV Q+ T K V
Sbjct: 401 SVWIWEATEDDEFDCLAVLQEHTQDVKVV 429
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 36.3 bits (80), Expect = 0.006
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Frame = +3
Query: 252 SHYNYT----AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGK 419
SHY +T AV I+P+G + G + L S L+ + K +NA+ FSP+
Sbjct: 187 SHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRY 246
Query: 420 YFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALD-EVTCLDWSSCSRLLAVGSKDTT 596
+ +++ + + V KK+ + E L WS + L G D
Sbjct: 247 WLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNL 306
Query: 597 TKIHTV 614
++ V
Sbjct: 307 IRVWQV 312
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 35.1 bits (77), Expect = 0.013
Identities = 25/105 (23%), Positives = 45/105 (42%)
Frame = +3
Query: 516 KKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKS 695
K + +TCL +S + LA G ++ E IT + HT +I+G+ + KS
Sbjct: 476 KDSTAPITCLAYSPDGKYLACGDASGKVVLYDANSREVITS-RWAFHTGRILGMSWNAKS 534
Query: 696 LDLITVSRNGQLCLWEASIDADXLAVKQDDTSRXKRVRXXNEGNL 830
L T S + + ++ +A+K + +V +E L
Sbjct: 535 THLATASLDTNIHIYSVERPMKYIAMKNAHSLGATQVEWVSENEL 579
Score = 30.7 bits (66), Expect = 0.29
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 387 VNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSR 566
+ + +SPDGKY A C D + V V + R I R + + + W++ S
Sbjct: 482 ITCLAYSPDGKYLA-CGDASGKV----VLYDANSREVITSR-WAFHTGRILGMSWNAKST 535
Query: 567 LLAVGSKDTTTKIHTVE 617
LA S DT I++VE
Sbjct: 536 HLATASLDTNIHIYSVE 552
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 33.1 bits (72), Expect = 0.054
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Frame = +3
Query: 381 QQVNAVKFSPDGKYFAVCCDNTVFVMTAPVH--------------FTGEYRPFIMKRVFK 518
Q VN V+F+P+G A D ++ P + EY + +K V +
Sbjct: 68 QAVNVVRFNPEGNILATAGDEGTIMLWVPTNTPITTLADDAEELALAKEY--WKVKIVCR 125
Query: 519 KALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSL 698
E+ L WS S L G+ D + +++ + +T H+ + GV ++ +
Sbjct: 126 SMGSEIYDLCWSVDSNFLIAGAMDNSLRLYDAHTGQLLT--QKFDHSHYVQGVCWDPLNQ 183
Query: 699 DLITVSRNGQLCLWE 743
+++ S + +CL+E
Sbjct: 184 YIVSESSDRSICLYE 198
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 32.7 bits (71), Expect = 0.071
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +3
Query: 534 VTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITV 713
V CL W+ +L+ GS+ H V + N + +L GH+ ++ G+ + L L +
Sbjct: 266 VGCLSWNR--HVLSSGSRSGAIHHHDVR-IANHQIGTLQGHSSEVCGLAWRSDGLQLASG 322
Query: 714 SRNGQLCLWEA 746
+ + +W+A
Sbjct: 323 GNDNVVQIWDA 333
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 528 DEVTCLDW-SSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKI 668
D+V+CLDW S +L GS D T KI + E + + ++ + +
Sbjct: 298 DKVSCLDWYSKAPSVLLSGSYDKTAKIADLRLEEAPSSFQVTSDVENV 345
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 30.3 bits (65), Expect = 0.38
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 531 EVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERK--SLDL 704
+V +DW LLA GSKD K + + +L GH + I+ F++ S L
Sbjct: 208 DVKTVDWHPSKGLLASGSKDNLVKFW--DPRTGTCIATLHGHKNTIMQASFQKNFGSNYL 265
Query: 705 ITVSRN 722
TVSR+
Sbjct: 266 ATVSRD 271
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 29.1 bits (62), Expect = 0.88
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 150 VLFSKXGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTAVDIAPNGMT--LLAVTEKG 323
VL + G+ VIS G I +++L + S++ + +A N LL+ G
Sbjct: 213 VLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQKSITCLAMNSENTRLLSGGLDG 272
Query: 324 EAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDN 443
+I +++ V+H K+ + ++ SPD V N
Sbjct: 273 HVKIYNISDWKVVHGMKYSGPILSMGLSPDSCNLVVGMSN 312
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 29.1 bits (62), Expect = 0.88
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 6/144 (4%)
Frame = +3
Query: 177 VISPVGNRITIYNLKQNK-SNTLSFESHYNY-TAVDIAPNGMTLLAVTEKGEAQIISL-- 344
V + N++ +Y N + +F H T VD AP ++ ++ A +
Sbjct: 27 VTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86
Query: 345 --TTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFK 518
T L + + V++SP+ FAV V + +F E ++ K + +
Sbjct: 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVC---YFEQENDWWVSKHLKR 143
Query: 519 KALDEVTCLDWSSCSRLLAVGSKD 590
+ LDW + LLA G D
Sbjct: 144 PLRSTILSLDWHPNNVLLAAGCAD 167
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 567 LLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEA 746
+L GS D++ +I V E +Y L GH+ +I V +E + I+ S + + +W+
Sbjct: 519 ILVSGSYDSSIRIWRVSTGE--CLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDL 576
Query: 747 S 749
S
Sbjct: 577 S 577
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +3
Query: 570 LAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWEAS 749
LA S D T I + E + + L GH + F S L+T S + LWE S
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELS 289
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/82 (20%), Positives = 35/82 (42%)
Frame = +3
Query: 498 IMKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGV 677
I R + A +V L S + LA + +++ + + + + GHT+ + +
Sbjct: 31 ICSRTIQHADSQVNRLCISPDKKFLAAAG-NPHVRLYDINTSSQMPLMTFEGHTNNVTAI 89
Query: 678 FFERKSLDLITVSRNGQLCLWE 743
F L T S +G + +W+
Sbjct: 90 AFHCDGKWLATSSEDGTVKVWD 111
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 27.9 bits (59), Expect = 2.0
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 498 IMKRV--FKKALDEVTC-LDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKI 668
+M+RV KK E C L+W+ A G D I ++ LEN Y + K
Sbjct: 277 MMRRVHTIKKVHQEQVCGLEWNYDGTQFASGGNDNLVCIFDIDSLENKKFYWIHLAAVKA 336
Query: 669 IGVFFERKSLDLITVSRNGQ 728
+ +KSL + N Q
Sbjct: 337 LAFCPWQKSLLAVGTGSNDQ 356
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 27.9 bits (59), Expect = 2.0
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +3
Query: 396 VKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLA 575
+K SP+G++ +VC + V TA +R + + KALD WS+ S +
Sbjct: 358 LKHSPNGRFVSVCGNGEYIVYTALA-----WR----NKAYGKALD----FAWSADSNVYG 404
Query: 576 VGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVF 680
+ D + IH + + LS DKI G F
Sbjct: 405 SRTSDRSIVIH--KNFKESNRLDLSYSCDKIFGGF 437
Score = 27.1 bits (57), Expect = 3.6
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 5/186 (2%)
Frame = +3
Query: 198 RITIYNLKQNKSNTLSFESHYNYT-AVDIAPNGMTLLAVTEKGEAQIIS--LTTSVVLHK 368
++ +YN + T FE+H +Y A+ + P LL ++ + + ++ V
Sbjct: 79 QVRVYNYNTGEKVT-QFEAHPDYIRALVVHPTQPFLLTSSDDMTIKCFNWDMSWKCVQTF 137
Query: 369 YKFKQQVNAVKFSP-DGKYFAVCC-DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTC 542
+ V ++ +P D FA C D TV V + F F ++ + ++ V
Sbjct: 138 EGHSRYVMSLAINPKDTNTFASSCLDGTVKVWS----FGSSVANFTLQ-AHDRGVNYVNY 192
Query: 543 LDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRN 722
L+ G D K+ +Y + L GHT+ + FF K +I+ S +
Sbjct: 193 YPAGDKPYLITAGD-DNLIKVW--DYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSED 249
Query: 723 GQLCLW 740
G + +W
Sbjct: 250 GTVKIW 255
>SPCC1753.05 |rsm1||RNA export factor Rsm1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 2.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 385 CCLNLYLCNTTEVVRLIICASPFSVTA 305
CCLN +LC + ++ +C + ++TA
Sbjct: 70 CCLNGWLCESNNILVCDVCRNKINLTA 96
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 348 TSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVM 458
T +VL K + + + A+ P G Y ++ +T+F++
Sbjct: 629 TKLVLSKEQMPRTLKAIALDPQGNYVSLFSKDTLFIL 665
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +3
Query: 519 KALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSL 698
+ +DE+ L W LA G D + + ++ + + + + GHT + F +
Sbjct: 144 ETVDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQV--MYGHTAPVNAGKFIPPGV 201
Query: 699 D--LITVSRNGQLCLWEASIDADXLAVKQDD 785
L TV +G L +W + A + DD
Sbjct: 202 GKRLATVDDSGTLIVWNPATGAPECRMSSDD 232
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 561 SRLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLW 740
S L A G D I + E I L+GH D I+ + + + T + Q+ LW
Sbjct: 74 SNLCASGGGDDLGYIWDITTGEQICQ--LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLW 131
Query: 741 EAS 749
++S
Sbjct: 132 KSS 134
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 26.6 bits (56), Expect = 4.7
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Frame = +3
Query: 438 DNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLD-WSSCSRLLAVGSKDTTTKIHTV 614
DN +F ++ H + ++ + ++++ WS + + + ++ I
Sbjct: 115 DNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASHCLIATAYRSSSIRLC 174
Query: 615 EYLENITMYSLSGHTDKIIGV-FFERKSLDLITVSRNGQLCLWE 743
+ +SLSGHT ++ V + + L + S +G LW+
Sbjct: 175 DMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWD 218
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +3
Query: 507 RVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSLSGH 656
RV EV L+W+S LLA G D + + E +YS H
Sbjct: 368 RVLTAHRQEVCGLEWNSNENLLASGGNDNALMVW--DKFEEKPLYSFHNH 415
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 26.2 bits (55), Expect = 6.2
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = +3
Query: 564 RLLAVGSKDTTTKIHTVEYLENITMYSLSGHTDKIIGVFFERKSLDLITVSRNGQLCLWE 743
R + GS D T K V E + +L GHTD + + + L++ S + L +W+
Sbjct: 103 RHIYTGSWDHTIKKWNVSTGECVE--TLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWD 160
Query: 744 ASIDADXLAVKQDDTSR 794
S L K SR
Sbjct: 161 VSSQPSRLLYKLTGHSR 177
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 192 GNRITIYNLKQNKSNTLSFESHY 260
G + T+YN +++ +TLSF+ +Y
Sbjct: 367 GLKQTVYNYQEDPKSTLSFKKNY 389
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 387 VNAVKFSPDGKYFAVCCDNTVFVM 458
V +V+FSP+G+Y A D+ V ++
Sbjct: 77 VTSVRFSPNGQYLASGSDDRVVII 100
>SPAC4A8.07c |||sphingoid long chain base |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 458
Score = 25.8 bits (54), Expect = 8.2
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 474 FTGEYRPFI--MKRVFKKALDEVTCLDWSSCSRLLAVGSKDTTTKIHTVEYLENITMYSL 647
F GE R ++ R+F+K DW CS + V S D T H E +N+ S
Sbjct: 267 FMGENRAYLGFFLRLFQKP-------DWK-CSIEMDVVSSDRTEIKHMYEKSKNLAPMSE 318
Query: 648 SGHTDKII 671
S +DK +
Sbjct: 319 SSDSDKTV 326
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,234,222
Number of Sequences: 5004
Number of extensions: 66554
Number of successful extensions: 276
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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