Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N12
         (942 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.47 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.62 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   1.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 15/51 (29%), Positives = 15/51 (29%)
 Frame = +3

Query: 480 PLPFPRXXXPPPPGXXGXXXXXPPPPXRKTGXPXXXGGGGEXPPPPXXGXG 632
           P  FP      PP          PPP    G P     G   P P   G G
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFG 620


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.62
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 883 GXXGKGPPXPGGXXGGXGXPXXXPGGG 803
           G  G G   PGG  G  G P    GGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 20/61 (32%), Positives = 22/61 (36%)
 Frame = -3

Query: 625 PXXGGGGXSPPPPXXXGXPVFRXGGGGXXXXXPXXPGGGGXXXRGKGRGAXXXXXXXQGG 446
           P  GGGG     P          GGGG     P   GGGG    G+ R         +GG
Sbjct: 200 PGAGGGGSGGGAP----------GGGGGSSGGPGPGGGGGGG--GRDRDHRDRDREREGG 247

Query: 445 G 443
           G
Sbjct: 248 G 248



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 21/68 (30%), Positives = 22/68 (32%)
 Frame = -3

Query: 688 GGGXQXXXPXGPXXXXGXXPXPXXGGGGXSPPPPXXXGXPVFRXGGGGXXXXXPXXPGGG 509
           GGG     P G     G  P P  GGGG                GG G         GGG
Sbjct: 204 GGGSGGGAPGGGGGSSGG-PGPGGGGGGGGRDRDHRDRDREREGGGNGGG-------GGG 255

Query: 508 GXXXRGKG 485
           G    G+G
Sbjct: 256 GMQLDGRG 263



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = -3

Query: 919 GGKXXXXXXSXXGXXGKGPPXPGGXXGGXG 830
           GG          G    G P PGG  GG G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 883 GXXGKGPPXPGGXXGGXGXPXXXPGGG 803
           G  G G P  GG   G   P    GGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGG 231


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/38 (39%), Positives = 16/38 (42%)
 Frame = -3

Query: 556 GGGGXXXXXPXXPGGGGXXXRGKGRGAXXXXXXXQGGG 443
           GGGG         G GG   RG+GRG         GGG
Sbjct: 65  GGGGRGGRG----GRGGGRGRGRGRGGRDGGGGFGGGG 98



 Score = 25.0 bits (52), Expect = 3.3
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 556 GGGGXXXXXPXXPGGGGXXXRGKGRGAXXXXXXXQGGG 443
           GG G         G GG   RG GRG         GGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGG 92


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +3

Query: 792 GXAGPPPGXXXGXPXPPXXPPGXGGPFPXXPXXEXXXXXXFPP 920
           G  GPP     G P  P  PP  GG +P  P          PP
Sbjct: 196 GNVGPP---RTGTPTQPQ-PPRPGGMYPQPPGVPMPMRPQMPP 234



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -3

Query: 856 PGGXXGGXGXPXXXPGGGPAXPPXG 782
           P G  G    P    GG P  PP G
Sbjct: 291 PSGMVGPPRPPMPMQGGAPGGPPQG 315



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 34/149 (22%), Positives = 36/149 (24%), Gaps = 7/149 (4%)
 Frame = +3

Query: 444 PPPWXXXGGGXAPLPF-PRXXXPPPPGXXGXXXXXPPPPXRKTGXPXXXGGGGEXPPPPX 620
           PPP        A  P  P    PP P          PP       P     GG  P PP 
Sbjct: 164 PPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223

Query: 621 XGXGXXPXXXXG--PXGXXXWXPPPXXXXXXPXXPXLG--GXXXXXXXXXXXXXXXXXXX 788
                 P    G  P       P P         P +G                      
Sbjct: 224 VPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQN 283

Query: 789 GGXAGPPPGXXXGXPXPPXXPPG--XGGP 869
              +G  P    G P PP    G   GGP
Sbjct: 284 SNLSGGMPSGMVGPPRPPMPMQGGAPGGP 312


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 871 KGPPXPGGXXGGXGXPXXXPGGGPAXPP 788
           KGPP P G  G  G        GPA  P
Sbjct: 715 KGPPGPPGFNGPKGDKGLPGLAGPAGIP 742


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -3

Query: 871 KGPPXPGGXXGGXGXPXXXPGGGPAXPPXG 782
           KG   P G  G  G P      GPA  P G
Sbjct: 376 KGQSGPKGEPGRDGIPGQPGIAGPAGAPGG 405


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
 Frame = -3

Query: 865 PPXPGGXXGGXGXPXXXPG-GGPAXPP 788
           PP PG   G  G P    G  GP  PP
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPP 112



 Score = 24.2 bits (50), Expect = 5.8
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = +3

Query: 804 PPPGXXXGXPXPPXXPPGXGGPFP 875
           P PG   G P  P    G  GP P
Sbjct: 87  PRPGMIPGMPGAPPLLMGPNGPLP 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,770
Number of Sequences: 2352
Number of extensions: 10680
Number of successful extensions: 65
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)