Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_N11
(927 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.019
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.40
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 24 4.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.002
Identities = 33/134 (24%), Positives = 36/134 (26%), Gaps = 2/134 (1%)
Frame = +1
Query: 466 PXPPPXTPXPXAFGXGXXFXPPPGGXXXXPPNPGXXPXKXFXPXXPXXPKXRKGXGWXXF 645
P PP P P + P P G P G P P PK
Sbjct: 1060 PSAPPPVPAPSS---EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA 1116
Query: 646 PXGPPP-PXXXXKIXPPXXGGXXPXGXXKXPGVPPXKXPXGPPP-XSPPXXXXXXPXPXX 819
P G PP P P P PP P G PP P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 820 XLXGXGGPFSXTPP 861
+ P + PP
Sbjct: 1177 GIPPVPKPAAGVPP 1190
Score = 37.1 bits (82), Expect = 0.004
Identities = 40/159 (25%), Positives = 42/159 (26%), Gaps = 12/159 (7%)
Frame = +1
Query: 421 PPPPXGXGXWFLXPXPXPPPXTPXPXAFGXGXXFXPPPGGXXXXPPNPGXXPXKXFXPXX 600
PP P G + P P P P P P G P P
Sbjct: 1083 PPVPAPSG---IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA 1139
Query: 601 PXXPKXRKGXGWXXFPXGPPP-PXXXXKIXP-PXXGGXXPXGXXKXPGVPPXKXPX---- 762
P PK P G PP P P P P GVPP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 763 ------GPPPXSPPXXXXXXPXPXXXLXGXGGPFSXTPP 861
G PP PP P P L P + PP
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/109 (22%), Positives = 28/109 (25%), Gaps = 1/109 (0%)
Frame = +1
Query: 460 PXPXPPPXTPXPXAFGXGXXFXPPPGGXXXXPPNPGXXPXKXFXPXXPXXPKXRKGXGWX 639
P P P P P P G P+ P P PK G
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 640 XFPX-GPPPPXXXXKIXPPXXGGXXPXGXXKXPGVPPXKXPXGPPPXSP 783
P PP P + P P G+PP P P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 461 PXPXPPPXPPXPXLSGGGXXXPPP 532
P P P PP P S G PPP
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +2
Query: 428 PPXXXGXGFWXPXPXPPPXPPXPXLSGGGXXXPPPQGGXXXXPQTRGXP 574
PP P P P PP P S G PPP + G P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 35/127 (27%), Positives = 37/127 (29%)
Frame = +1
Query: 427 PPXGXGXWFLXPXPXPPPXTPXPXAFGXGXXFXPPPGGXXXXPPNPGXXPXKXFXPXXPX 606
PP G G P PPP P + G PP G PP P P P P
Sbjct: 325 PPIGNGSSNSSLPPPPPP----PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP--PP 378
Query: 607 XPKXRKGXGWXXFPXGPPPPXXXXKIXPPXXGGXXPXGXXKXPGVPPXKXPXGPPPXSPP 786
R P PPP I P G PP P PP +PP
Sbjct: 379 LSSSRAVSN----PPAPPP-----AIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Query: 787 XXXXXXP 807
P
Sbjct: 430 SLPPSAP 436
Score = 34.7 bits (76), Expect = 0.019
Identities = 40/157 (25%), Positives = 42/157 (26%), Gaps = 11/157 (7%)
Frame = +1
Query: 349 PPPWXSFFFXGXGGGXGGFXXFKXPPPPXGXGXWFLXPXPXPPPXT----PXPXAFGXGX 516
PPP S G G PPPP P PP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 517 XFXPPPGGXXXXPPNPGXXPXKXFXPXXPXXPKXRKGXGWXXFPXGPPP--PXXXXKIXP 690
PPP NP P P P P PP P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP 432
Query: 691 PXXGGXXPXGXXKXPGVPPXKXPXGPP-----PXSPP 786
P P G P +PP P PP P +PP
Sbjct: 433 PSAPPSLPMGAPAAPPLPP-SAPIAPPLPAGMPAAPP 468
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +1
Query: 646 PXGPPPPXXXXKIXPPXXGGXXPXGXXKXPGVPPXKXPXGPPPXSPPXXXXXXPXP 813
P PPPP + PP G P PP G P P P P
Sbjct: 311 PPPPPPPSRRNRGKPP-IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 476 PPXPPXPXLSGGGXXXPPPQGGXXXXP 556
PP PP P + G PPQG P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPP 363
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 732 PXXSPLEXPPXAXPLVPTXXXXRXPXPPFXP 824
P +P PP A P +P P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.019
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 413 LXNPPPPXXXGXGFWXPXPXPPPXPPXPXLSGGGXXXPPPQG 538
L PPP P P P P PP + GG PPP G
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 422 PPPPXXXGXGFWXPXPXPPPXPPXPXLSGGGXXXPPPQ 535
PPPP G P P PPP PP G P PQ
Sbjct: 762 PPPPPPPGVAGAGPPPPPPP-PPAVSAGGSRYYAPAPQ 798
Score = 33.1 bits (72), Expect = 0.057
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 415 KXPPPPXGXGXWFLXPXPXPPPXTPXPXAFGXGXXFXPPPGGXXXXPPNPGXXP 576
K PPPP P P P P P G PPPG PP P P
Sbjct: 730 KSPPPPP-PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 32.7 bits (71), Expect = 0.075
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 473 PPPXPPXPXLSGGGXXXPPP 532
PPP PP P ++G G PPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPP 780
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 421 PPPPXGXGXWFLXPXPXPPPXTPXPXAFGXGXXFXPPP 534
PPPP G P PPP P + G + P P
Sbjct: 764 PPPPPGVAG----AGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Frame = +1
Query: 655 PPPPXXXXKIXPPXXGGXXPX----GXXKXPGVPPXKXPXGPPPXSPP 786
PPPP P P G P PP GPPP PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 419 NPPPPXXXGXGFWXPXPXPPPXPP 490
NPPPP GF P PPP PP
Sbjct: 8 NPPPPPPP-PGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 461 PXPXPPPXPPXPXLSGGGXXXPPPQGG 541
P PPP PP P PPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -1
Query: 837 PPXPKGXXGXRXXGXXXGWGXGGXPXGGFXGGNXXXFXXXXRG 709
P G G R G GG GGF GG+ F RG
Sbjct: 134 PAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 25.8 bits (54), Expect = 8.7
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = -3
Query: 850 GKRXPPXPXGXXGGX-GXRXXXXVGTRGXAXGGXSRGEXXGFXXXXAGXXPXXMGGGFXX 674
G R P G GG G R G G + GG G GF G GGF
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSR----GGFRG 184
Query: 673 XXXGG 659
GG
Sbjct: 185 GSRGG 189
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -2
Query: 632 PXPFRXLGXXGXXGXKXFXGXXPGFGGXXXXPPGGGXNXXPXPKAXXXXXXXXGXGXGXK 453
P P G G G G GFGG GG P G G G
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGF 261
Query: 452 NQXPXPXGGGG 420
P GG G
Sbjct: 262 GGGPGGHGGPG 272
Score = 21.0 bits (42), Expect(2) = 4.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 782 GDXGGGPXGXFXGGTPGXFXXPXG 711
G GGG G F GG+ G P G
Sbjct: 184 GHNGGG-FGGFGGGSGGPPPGPGG 206
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +1
Query: 655 PPPPXXXXKIXPPXXGGXXPXGXXKXPGVPPXKXPXGPPPXSP 783
P PP + PP P G P PP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAG---PPSAPPPPLPASSAPSVP 1744
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/84 (25%), Positives = 24/84 (28%), Gaps = 7/84 (8%)
Frame = +1
Query: 556 PNPGXXPXKXFXPXXPXXPKXRKGXGWXXFPXGPPPPXXXXKIXPP-XXGGXXPXGXXKX 732
PN P F P P + P PPPP + G
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVS 220
Query: 733 PGVPPXKXP------XGPPPXSPP 786
P +PP P PPP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,036,235
Number of Sequences: 5004
Number of extensions: 33263
Number of successful extensions: 213
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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