Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N07
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0511 + 18002930-18003104,18003137-18003180,18003194-18003793     30   2.8  
01_06_1030 - 33942841-33943790,33944748-33944811                       29   3.7  
07_03_1160 - 24430240-24431268                                         29   4.9  
02_04_0382 - 22501041-22501279,22501717-22501810                       29   4.9  
05_05_0341 + 24226199-24226245,24226296-24226348,24228335-24229305     29   6.5  
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220     29   6.5  
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235           29   6.5  
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836...    28   8.6  
02_03_0116 - 15440263-15441024,15441097-15443451                       28   8.6  

>08_02_0511 + 18002930-18003104,18003137-18003180,18003194-18003793
          Length = 272

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +1

Query: 598 VPSSPTHYEQPPTPDHPPXFGKAGGEQYSRENSTFESGVQKKIDAA 735
           +P    H  +PPTPD  P   ++ G++Y++ +   E  V+   +A+
Sbjct: 1   MPPRTRHGRRPPTPD--PVSEESSGDEYTQSDEEVEENVEGASEAS 44


>01_06_1030 - 33942841-33943790,33944748-33944811
          Length = 337

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 519 GTPLLVRVFPYSAHLASVELVRTE 448
           GTPLLV V+PY A+ A    VR +
Sbjct: 188 GTPLLVNVYPYFAYSADPSSVRLD 211


>07_03_1160 - 24430240-24431268
          Length = 342

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 601 PSSPTHYEQPPTPDHP 648
           P  P +YEQPP PD P
Sbjct: 313 PPQPEYYEQPPKPDAP 328


>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = +1

Query: 601 PSSPTHYEQPPTPDH---PPXFGKAGGEQYSR 687
           P SP +Y+ PP+PD+   PP     GG  Y +
Sbjct: 66  PHSPDYYDPPPSPDYYDPPPSPYYGGGGGYGK 97


>05_05_0341 + 24226199-24226245,24226296-24226348,24228335-24229305
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 519 GTPLLVRVFPYSAHLASVELVR 454
           G PLLV V+PY A+ A  E V+
Sbjct: 202 GAPLLVNVYPYFAYAADAERVQ 223


>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
          Length = 1053

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 98  RRRARTPPPNTCAPNRRKSIKEGPSSEA 15
           RRRARTPPP +    RR+   EG    A
Sbjct: 24  RRRARTPPPPSRRSLRREEALEGVERSA 51


>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
          Length = 1293

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 98  RRRARTPPPNTCAPNRRKSIKEGPSSEA 15
           RRRARTPPP +    RR+   EG    A
Sbjct: 24  RRRARTPPPPSRRSLRREEALEGVERSA 51


>08_02_1329 -
           26182762-26183007,26183149-26183249,26183533-26183602,
           26183692-26183895,26186435-26186941,26188672-26188677
          Length = 377

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +1

Query: 601 PSSPTHYEQPPT--PDHPPXFGKAGGEQYSR 687
           P  P+H+E+ P+  P  PP    AGG  Y R
Sbjct: 70  PPPPSHHERAPSDAPPPPPPAPYAGGSPYHR 100


>02_03_0116 - 15440263-15441024,15441097-15443451
          Length = 1038

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 98 RRRARTPPPNTCAPNRRKSIKEG 30
          RRRARTPPP +    RR+   EG
Sbjct: 24 RRRARTPPPPSRRSLRREEALEG 46


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,423,245
Number of Sequences: 37544
Number of extensions: 369030
Number of successful extensions: 1917
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)