Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N04
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro...    30   3.6  
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA...    30   3.6  

>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p
           protein.
          Length = 2313

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = -3

Query: 669 GPPSQRHPSADRGSGPVVPPRFLLRK-GAGLPHIDWCRQRLE----PSQREDRISLKSLK 505
           GPPS   P A RG G   PP+  L   G   PHI+   +  +    P+  ED+ S +S  
Sbjct: 5   GPPSNPSPVASRGRGRGRPPKVALSALGNTPPHINPSLKHADAEASPTAPEDQDSGQSEC 64

Query: 504 TESSPKTDLSXK-EETLTTDQPAH 436
             SS K  +     + L  ++ AH
Sbjct: 65  RRSSRKKIIKFDVRDLLNKNRKAH 88


>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
           protein.
          Length = 2362

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
 Frame = -3

Query: 669 GPPSQRHPSADRGSGPVVPPRFLLRK-GAGLPHIDWCRQRLE----PSQREDRISLKSLK 505
           GPPS   P A RG G   PP+  L   G   PHI+   +  +    P+  ED+ S +S  
Sbjct: 5   GPPSNPSPVASRGRGRGRPPKVALSALGNTPPHINPSLKHADAEASPTAPEDQDSGQSEC 64

Query: 504 TESSPKTDLSXK-EETLTTDQPAH 436
             SS K  +     + L  ++ AH
Sbjct: 65  RRSSRKKIIKFDVRDLLNKNRKAH 88


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,511,321
Number of Sequences: 53049
Number of extensions: 841074
Number of successful extensions: 2131
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)