Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N03
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0500 - 18120287-18122233                                         30   2.1  
04_04_1523 - 34148407-34150224                                         29   6.5  
10_05_0055 - 8625420-8625737,8625835-8625988,8626202-8626439,862...    28   8.6  

>09_04_0500 - 18120287-18122233
          Length = 648

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = +3

Query: 459 GVRSAAAWIRDHPQFAHV-PSLTYKITFNLCSTYCALKRRSK 581
           G+R  AA++ DH  FA+V P++  KIT ++ +    +  +SK
Sbjct: 211 GLREVAAYLLDHDNFANVPPTMLVKITHSVFNVNDTVSCKSK 252


>04_04_1523 - 34148407-34150224
          Length = 605

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 459 GVRSAAAWIRDHPQFAHV-PSLTYKITFNLCSTYC 560
           G R  AA++ DH  FA+V P+   KIT ++    C
Sbjct: 211 GFREVAAYLLDHDNFANVPPTALVKITHSIFHINC 245


>10_05_0055 -
           8625420-8625737,8625835-8625988,8626202-8626439,
           8626610-8626820,8626909-8627033,8627451-8627570,
           8627749-8628625
          Length = 680

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 23/72 (31%), Positives = 29/72 (40%)
 Frame = -2

Query: 520 RLGT*ANWGWSLIHAAALRTPQHHC*ALIREVAFIEAFVDTVVGIVFDLVT*FICFIRFS 341
           R G  A WG +L      R     C A +  VAF E   D  V + +D      C  RFS
Sbjct: 78  RGGADAVWGLALCRGDTDRAGCASCLAAVPAVAFGECRGDRDVAVFYDR-----CLARFS 132

Query: 340 WCLHTWRTSNCD 305
           +   T R  N +
Sbjct: 133 YADFTSRPDNTE 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,377,709
Number of Sequences: 37544
Number of extensions: 458325
Number of successful extensions: 1112
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)