Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_N01
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0566 - 19572410-19572504,19572590-19572708,19573109-195731...    62   6e-10
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535...    62   7e-10
04_04_1208 - 31750493-31750587,31750733-31750851,31751425-317514...    62   7e-10
11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834                35   0.073
02_04_0068 - 19442643-19442734,19442824-19442885,19443013-194430...    34   0.17 
07_01_0055 + 424097-427129                                             28   8.4  

>07_03_0566 -
           19572410-19572504,19572590-19572708,19573109-19573161,
           19573251-19573306,19574297-19574340,19576767-19576816,
           19577393-19577398,19577675-19578103
          Length = 283

 Score = 62.1 bits (144), Expect = 6e-10
 Identities = 24/74 (32%), Positives = 51/74 (68%)
 Frame = +1

Query: 43  LGRTKFLVPQELTMSQFLYIIRTKMKLRDSQALYLLVNDKVLASHSMTMAQAYQQFRSHD 222
           + + K+LVP +LT+ QF+Y++R ++KL   +A+++ V + +  + S+ M+  Y++ +  D
Sbjct: 209 IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASL-MSAIYEENKDED 267

Query: 223 GYLHITYAAQQVFG 264
           G+L++TY+ +  FG
Sbjct: 268 GFLYMTYSGENTFG 281


>08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,
            5350375-5350589,5351123-5351393,5351986-5352161,
            5352287-5352394,5352821-5352930,5354291-5354393,
            5354658-5354828,5354952-5355080,5355322-5355504,
            5355612-5355701,5355823-5355934,5356100-5356227,
            5357769-5357825,5357872-5357923,5358318-5358393,
            5358860-5358950,5359046-5359224,5359563-5359681,
            5359783-5359880
          Length = 1955

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 27/80 (33%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
 Frame = +1

Query: 31   ILKIL--GRTKFLVPQELTMSQFLYIIRTKMKLRDSQALYLLVNDKVLASHSMTMAQAYQ 204
            +LKI+    T++LVP +LT+ QF+Y++R ++KL   +A+++ V +  L   +  M+  Y+
Sbjct: 1874 LLKIVLANYTRYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKN-TLPPTAALMSAIYE 1932

Query: 205  QFRSHDGYLHITYAAQQVFG 264
            + +  DG+L++TY+ +  FG
Sbjct: 1933 ENKDEDGFLYMTYSGENTFG 1952


>04_04_1208 -
           31750493-31750587,31750733-31750851,31751425-31751477,
           31751567-31751622,31752690-31752726
          Length = 119

 Score = 61.7 bits (143), Expect = 7e-10
 Identities = 24/74 (32%), Positives = 49/74 (66%)
 Frame = +1

Query: 43  LGRTKFLVPQELTMSQFLYIIRTKMKLRDSQALYLLVNDKVLASHSMTMAQAYQQFRSHD 222
           + + K+LVP +LT+ QF+Y++R ++KL   +A+++ V +  L   +  M+  Y++ +  D
Sbjct: 45  IDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKN-TLPPTAALMSAIYEENKDED 103

Query: 223 GYLHITYAAQQVFG 264
           G+L++TY+ +  FG
Sbjct: 104 GFLYMTYSGENTFG 117


>11_01_0001 - 336-427,515-576,704-756,974-1249,1496-1834
          Length = 273

 Score = 35.1 bits (77), Expect = 0.073
 Identities = 16/69 (23%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  LVPQELTMSQFLYIIRTKMKLRDSQALYLLVNDKVLASHSMTMAQAYQQFRSH-DGYLHI 237
           ++ ++ + S    + + K+ L    AL++ VN+  L   +  M   Y+ ++   DG+L++
Sbjct: 206 VIVEKFSRSNLPEMEKRKLHLSPGTALFVFVNN-TLPQTAQLMGSVYESYKDEGDGFLYL 264

Query: 238 TYAAQQVFG 264
            Y++++ FG
Sbjct: 265 CYSSEKTFG 273


>02_04_0068 -
           19442643-19442734,19442824-19442885,19443013-19443067,
           19443290-19443344
          Length = 87

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 106 RTKMKLRDSQALYLLVNDKVLASHSMTMAQAYQQFRSH-DGYLHITYAAQQVFG 264
           + K+ L    AL++ VN+  L   +  M   Y+ ++   DG+L++ Y++++ FG
Sbjct: 35  KRKLHLPPGTALFVFVNN-TLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 87


>07_01_0055 + 424097-427129
          Length = 1010

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 271 TFIRRLVVLHK*YAGSHRESGTAGTPAPSSYCGSPKLCRSQA 146
           TF+ +  V H    G     G   T + SS+ G+P LCRS +
Sbjct: 598 TFLSKFSVAHNHLVGPIPNGGQFFTFSNSSFEGNPGLCRSSS 639


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,539,100
Number of Sequences: 37544
Number of extensions: 284093
Number of successful extensions: 737
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)