Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M24
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        28   0.11 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    27   0.19 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    27   0.19 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    27   0.19 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    27   0.19 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   2.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   9.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.4  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 179 PGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPLTN 289
           PG+   P  P L H I+ NP  + ++  S NL PL N
Sbjct: 328 PGHSTSPNLP-LTHNIAHNPYPSHSIYPSSNLMPLNN 363


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 570  NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 671
            +G  +   G+G DRI   + IH     +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 570  NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 671
            +G  +   G+G DRI   + IH     +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 570  NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 671
            +G  +   G+G DRI   + IH     +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 570  NGSLKTQ*GTGGDRISNHRNIHTFHLTSQNQRSI 671
            +G  +   G+G DRI   + IH     +Q +R I
Sbjct: 1398 DGDYENDSGSGPDRIGRRKTIHNLERAAQKKRQI 1431


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 558 VSNRNGSLKTQ*GTGGDRISNHRNIH 635
           +SN N SL       GD +  H+N+H
Sbjct: 191 ISNLNTSLIHSTHLNGDIVKEHQNLH 216


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 161 AAVQGPPGNKQWPARPGL 214
           AAVQ P G ++  ARPG+
Sbjct: 32  AAVQVPQGGRRRAARPGV 49


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 102 KIVLPNQTSVKYSANLI 52
           K V+P+Q+++KY   +I
Sbjct: 275 KTVMPSQSAIKYRKQVI 291


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 655 CDVRWNVW 632
           CDV WN W
Sbjct: 108 CDVFWNCW 115


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -1

Query: 655 CDVRWNVW 632
           CDV WN W
Sbjct: 108 CDVFWNCW 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,565
Number of Sequences: 336
Number of extensions: 4203
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)