Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M24
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001403-1|AAH01403.1| 227|Homo sapiens nudix (nucleoside dipho... 321 2e-87
AJ001810-1|CAA05026.1| 227|Homo sapiens pre-mRNA cleavage facto... 321 2e-87
BX537360-1|CAD97606.1| 227|Homo sapiens hypothetical protein pr... 319 9e-87
CR456919-1|CAG33200.1| 227|Homo sapiens CPSF5 protein. 318 2e-86
D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein. 31 4.1
AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing ... 31 4.1
AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein. 31 4.1
AY358336-1|AAQ88702.1| 509|Homo sapiens DFLL295 protein. 31 7.1
Z98048-5|CAI20493.1| 309|Homo sapiens protein ( Human DNA seque... 30 9.4
CR456468-1|CAG30354.1| 309|Homo sapiens dJ408N23.2 protein. 30 9.4
BC112135-1|AAI12136.1| 309|Homo sapiens DnaJ (Hsp40) homolog, s... 30 9.4
AY376108-1|AAQ88000.1| 118|Homo sapiens immunoglobulin E heavy ... 30 9.4
AF085232-1|AAL40391.1| 309|Homo sapiens HSC3 protein. 30 9.4
>BC001403-1|AAH01403.1| 227|Homo sapiens nudix (nucleoside
diphosphate linked moiety X)-type motif 21 protein.
Length = 227
Score = 321 bits (788), Expect = 2e-87
Identities = 144/168 (85%), Positives = 158/168 (94%)
Frame = +2
Query: 248 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 427
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 428 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLXRQDGVKQEWLIEDTIGNWWR 607
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE L RQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 608 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPL 751
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPL
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPL 198
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 763 DNAQGYGPIISSLSXSXCRXNXIY 834
DNA GYGPIISSL R N IY
Sbjct: 203 DNAPGYGPIISSLPQLLSRFNFIY 226
>AJ001810-1|CAA05026.1| 227|Homo sapiens pre-mRNA cleavage factor I
25 kDa subunit protein.
Length = 227
Score = 321 bits (788), Expect = 2e-87
Identities = 144/168 (85%), Positives = 158/168 (94%)
Frame = +2
Query: 248 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 427
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 428 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLXRQDGVKQEWLIEDTIGNWWR 607
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE L RQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 608 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPL 751
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPL
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPL 198
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 763 DNAQGYGPIISSLSXSXCRXNXIY 834
DNA GYGPIISSL R N IY
Sbjct: 203 DNAPGYGPIISSLPQLLSRFNFIY 226
>BX537360-1|CAD97606.1| 227|Homo sapiens hypothetical protein
protein.
Length = 227
Score = 319 bits (783), Expect = 9e-87
Identities = 143/168 (85%), Positives = 158/168 (94%)
Frame = +2
Query: 248 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 427
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 428 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLXRQDGVKQEWLIEDTIGNWWR 607
LPHVLLLQLGT FFKLPGGEL+PGEDE++GLKRL+TE L RQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 608 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPL 751
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPL
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPL 198
Score = 34.7 bits (76), Expect = 0.44
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 763 DNAQGYGPIISSLSXSXCRXNXIY 834
DNA GYGPIISSL R N IY
Sbjct: 203 DNAPGYGPIISSLPQPLSRFNFIY 226
>CR456919-1|CAG33200.1| 227|Homo sapiens CPSF5 protein.
Length = 227
Score = 318 bits (781), Expect = 2e-86
Identities = 143/168 (85%), Positives = 157/168 (93%)
Frame = +2
Query: 248 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 427
LTL R+INLYPLTNYTFGTKEPL+EK +SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 428 LPHVLLLQLGTAFFKLPGGELNPGEDEIDGLKRLLTETLXRQDGVKQEWLIEDTIGNWWR 607
LPHVLLLQLGT FFKLPGGELNPGEDE++GLKRL+TE L RQDGV Q+W+I+D IGNWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 608 PNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPL 751
PNFEPPQYPYIP HITKPKEHK+LFLVQLQ++ALFAVPKNYKLVAAPL
Sbjct: 151 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKNYKLVAAPL 198
Score = 34.3 bits (75), Expect = 0.58
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = +1
Query: 763 DNAQGYGPIISSLSXSXCRXNXIY 834
DNA GYGPIISSL R N IY
Sbjct: 203 DNAPGYGPIISSLPQLLSRFNFIY 226
>D29642-1|BAA06125.2| 666|Homo sapiens KIAA0053 protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +2
Query: 482 GELNPGEDEIDGLKRLLTETLXRQDGVKQEWLIEDTIGNWWRPNFE 619
G+ N GE+EID L+R++ E R++ Q+ + E+ I N + N++
Sbjct: 562 GKKNSGEEEIDSLQRMVQE--LRKEIETQKQMYEEQIKNLEKENYD 605
>AF386649-1|AAL26987.1| 1362|Homo sapiens bromodomain-containing 4
protein.
Length = 1362
Score = 31.5 bits (68), Expect = 4.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 584 DTIGNWWRPNFEPPQYPYIPPHITKPKEH 670
D IG++ +P PQ P +PPH+ +P EH
Sbjct: 818 DPIGHFTQPILHLPQ-PELPPHLPQPPEH 845
>AC097495-2|AAY15074.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +2
Query: 482 GELNPGEDEIDGLKRLLTETLXRQDGVKQEWLIEDTIGNWWRPNFE 619
G+ N GE+EID L+R++ E R++ Q+ + E+ I N + N++
Sbjct: 454 GKKNSGEEEIDSLQRMVQE--LRKEIETQKQMYEEQIKNLEKENYD 497
>AY358336-1|AAQ88702.1| 509|Homo sapiens DFLL295 protein.
Length = 509
Score = 30.7 bits (66), Expect = 7.1
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 539 TLXRQDGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHIT 655
T+ + D W I D WW PP+ PYIPP IT
Sbjct: 275 TILKGDTGNNNW-IPDVGSTWW-----PPKTPYIPPIIT 307
>Z98048-5|CAI20493.1| 309|Homo sapiens protein ( Human DNA sequence
from clone RP3-408N23 on chromosome 22q13. ).
Length = 309
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 461 QCRVAVTAHEVDHVHVLITHLRPTFSFRFYKTPLASSGTSPG 336
+C T H+ D V I H R FSF F++ L PG
Sbjct: 83 ECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLLNRPG 124
>CR456468-1|CAG30354.1| 309|Homo sapiens dJ408N23.2 protein.
Length = 309
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 461 QCRVAVTAHEVDHVHVLITHLRPTFSFRFYKTPLASSGTSPG 336
+C T H+ D V I H R FSF F++ L PG
Sbjct: 83 ECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLLNRPG 124
>BC112135-1|AAI12136.1| 309|Homo sapiens DnaJ (Hsp40) homolog,
subfamily B, member 7 protein.
Length = 309
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 461 QCRVAVTAHEVDHVHVLITHLRPTFSFRFYKTPLASSGTSPG 336
+C T H+ D V I H R FSF F++ L PG
Sbjct: 83 ECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLLNRPG 124
>AY376108-1|AAQ88000.1| 118|Homo sapiens immunoglobulin E heavy
chain variable region protein.
Length = 118
Score = 30.3 bits (65), Expect = 9.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 648 TSQNQRSISAYSWFNCKTELYLLYRRITSWSRHHCW 755
TS+NQ S++ S T +Y R WSR CW
Sbjct: 73 TSRNQFSLNLRSVSAADTAVYYCAREPDGWSRFDCW 108
>AF085232-1|AAL40391.1| 309|Homo sapiens HSC3 protein.
Length = 309
Score = 30.3 bits (65), Expect = 9.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 461 QCRVAVTAHEVDHVHVLITHLRPTFSFRFYKTPLASSGTSPG 336
+C T H+ D V I H R FSF F++ L PG
Sbjct: 83 ECEYGFTFHKPDDVFKEIFHERDPFSFHFFEDSLEDLLNRPG 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,083,489
Number of Sequences: 237096
Number of extensions: 2672137
Number of successful extensions: 7029
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7019
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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