Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M20
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0307 - 22190310-22190468,22190516-22190569,22190677-221910...    29   3.7  
06_03_0554 - 22057957-22058014,22058093-22058426,22058446-220589...    29   4.9  
06_03_0505 + 21545547-21545813,21546075-21546167,21546535-215467...    29   6.5  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.6  

>09_06_0307 -
           22190310-22190468,22190516-22190569,22190677-22191053,
           22191234-22191436,22192798-22192925
          Length = 306

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 700 GRKADRYPVSGQGSEQESARGSFQGGNAWYLYSPVG 593
           G K D   VSG G+  E+ RG    G+ W  +S VG
Sbjct: 86  GAKVDDTGVSGAGAASEADRGGAAAGSCW-AFSAVG 120


>06_03_0554 -
           22057957-22058014,22058093-22058426,22058446-22058977,
           22059211-22059459,22059551-22059563,22059608-22059942
          Length = 506

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 557 SQKSTLKSEVAKPDRTIKIPGVSPLEAPSCALLFRPLPAYRIPV 688
           S K+++K+E+A  +   K+  +   E  SC L  R +P + +PV
Sbjct: 176 SNKASIKAELAS-EFDEKLESMRAKEPTSCTLTVRVMPTFTVPV 218


>06_03_0505 +
           21545547-21545813,21546075-21546167,21546535-21546747,
           21548933-21549124,21549217-21550197
          Length = 581

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 602 TIKIPGVSPLEAPSCALL-FRPLPAYRIPVRLSPLREAW 715
           ++ + G  P  AP+ A+L +RP  A R+P    P   AW
Sbjct: 302 SVGVRGRQPRTAPALAVLNYRPNRASRLPAAAPPATPAW 340


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,180,090
Number of Sequences: 37544
Number of extensions: 496032
Number of successful extensions: 1526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)