Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M18
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.017
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.28
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.49
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.64
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.0
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 27 3.4
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 3.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.5
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.017
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +1
Query: 583 PPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXPPPP 762
PPPPP P AP P P P PPP G G P PPPP
Sbjct: 732 PPPPPPAVIVPTP-APAPIPVPPPAPIMGGPP---------PPPPPPGVAGAGPPPPPPP 781
Query: 763 GXA 771
A
Sbjct: 782 PPA 784
Score = 33.5 bits (73), Expect = 0.039
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 712 PPPXXARGXGXPXPPPPGXAXXXPP 786
PPP G P PPPPG A PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 29.1 bits (62), Expect = 0.85
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXP 642
G PPPPP P PPP P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 573 GXPPPPPPXXKXXXXXGGPPPXSP 644
G PPPPPP GPPP P
Sbjct: 759 GGPPPPPP--PPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 573 GXPPPPPPXXKXXXXXGGPPPXSP 644
G PPPPPP PPP P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 710 PPPPXXRGXXGSPXPPPXXGRPKXPP 787
PPPP G G+ PPP P PP
Sbjct: 762 PPPPPPPGVAGAGPPPP----PPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/69 (27%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Frame = +1
Query: 583 PPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXA-RGXGXPXPPP 759
PPPPP PPP P PP A R P P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 760 PGXAXXXPP 786
P PP
Sbjct: 421 PSLPPSAPP 429
Score = 29.9 bits (64), Expect = 0.49
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = +1
Query: 589 PPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXPPPPGX 768
PP P APP P P P PP A G P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA---GMPAAPPLPP 471
Query: 769 AXXXPP 786
A PP
Sbjct: 472 AAPAPP 477
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +1
Query: 628 PPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXPPPPGXAXXXPP 786
PPP P + G PPP + G PP G + PP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 710 PPPPXXRGXXGSPXPPPXXGRPKXPPXXXXXXP 808
PPPP R P P GR PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.49
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 655 GXXXGXXGGGPPXXXXFXXXGGGGGGXPAXKXGGGGGAXPXG 530
G G GG PP F GG GG GG G P G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGG 232
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 643 GXXGGGPPXXXXFXXXGGGGGGXPAXKXGGGGGAXPXGGXFXXF 512
G GG GGG GG G GGG GG F
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -3
Query: 643 GXXGGGPPXXXXFXXX-GGGGGGXPAXKXGGGGGAXPXGG 527
G GGGP GGG GG G GGG GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -3
Query: 643 GXXGGGPPXXXXFXXXGGGGGGXPAXKXGGGGG 545
G GGGP F GG GG P GG GG
Sbjct: 238 GGFGGGP---GGFGGGLGGFGGGPGGFGGGPGG 267
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.64
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = +1
Query: 589 PPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXPPPPGX 768
PP P APPP P + P G PP P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 769 AXXXPP 786
A P
Sbjct: 1110 AVPPVP 1115
Score = 27.9 bits (59), Expect = 2.0
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 4/75 (5%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXP---GAPP-PXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXG 741
G P P P P GAPP P P P G K PP A G
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS-GAPPVPKPSVAAPPVPAPSSG 1177
Query: 742 XPXPPPPGXAXXXPP 786
P P P A PP
Sbjct: 1178 IPPVPKP--AAGVPP 1190
Score = 27.9 bits (59), Expect = 2.0
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 4/75 (5%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXP---GAPP-PXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXG 741
G P P P P GAPP P P P G K PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 742 XPXPPPPGXAXXXPP 786
P P P PP
Sbjct: 1198 PPVPKPSVGVPPVPP 1212
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 583 PPPPPXXKXXXXPGAPPPXP 642
PPPPP P PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 573 GXPPPPPPXXKXXXXXGGPPPXSP 644
G PPPPPP PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXP 678
G PPPPP PPP P K P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +1
Query: 583 PPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXPPPP 762
PPPP K PG P P P PPP G PPPP
Sbjct: 208 PPPPMHHK----PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXP 753
G PPPP PG P P P PPP G P
Sbjct: 217 GEHMPPPPMHHE---PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 273
Query: 754 PPP 762
PPP
Sbjct: 274 PPP 276
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXP 753
G PPPP PG P P P PPP G P
Sbjct: 230 GEHMPPPPMHHE---PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 286
Query: 754 PPP 762
PPP
Sbjct: 287 PPP 289
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXP 753
G PPPP PG P P P PPP G P
Sbjct: 243 GEHMPPPPMHHE---PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 299
Query: 754 PPP 762
PPP
Sbjct: 300 PPP 302
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXP 753
G PPPP PG P P P PPP G P
Sbjct: 256 GEHMPPPPMHHE---PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 312
Query: 754 PPP 762
PPP
Sbjct: 313 PPP 315
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXP 753
G PPPP PG P P P PPP G P
Sbjct: 269 GEHMPPPPMHHE---PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 325
Query: 754 PPP 762
PPP
Sbjct: 326 PPP 328
Score = 27.5 bits (58), Expect = 2.6
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 574 GXXPPPPPXXKXXXXPGAPPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXP 753
G PPPP PG P P P PPP G P
Sbjct: 282 GEHMPPPPMHHE---PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 338
Query: 754 PPP 762
PPP
Sbjct: 339 PPP 341
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 595 GGGGGGXPAXKXGGGGGAXPXGGXFXXFF 509
GG GGG GGG G P G F F
Sbjct: 81 GGPGGGPGEGFPGGGFGFDPFGDIFDNIF 109
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.0 bits (47), Expect(2) = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 573 GXPPPPPP 596
G PPPPPP
Sbjct: 304 GLPPPPPP 311
Score = 22.2 bits (45), Expect(2) = 3.5
Identities = 8/19 (42%), Positives = 8/19 (42%)
Frame = +3
Query: 579 PPPPPPXXKXXXXXGGPPP 635
PPPPPP P P
Sbjct: 309 PPPPPPSNDFWKDSNEPAP 327
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +1
Query: 625 APPPXPXXXTPKXXXXXPGGXXXXKXXXXPPPXXARGXGXPXPPPPGXAXXXPP 786
APP P TP+ P PPP A P PP + PP
Sbjct: 123 APPSAPAPPTPQSELRPP--TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 571 RGXXPPPPPXXKXXXXPGAPPP 636
RG PPPP P PPP
Sbjct: 43 RGLTIPPPPSVDHSAPPSGPPP 64
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.151 0.526
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,614,683
Number of Sequences: 5004
Number of extensions: 21090
Number of successful extensions: 219
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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