Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M17
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0184 - 11577331-11577360,11577616-11577722,11578048-115781...    31   1.2  
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235...    31   1.6  
10_06_0183 - 11562576-11562824,11563894-11564000,11564494-115645...    29   3.7  
06_03_1167 + 28111923-28113218                                         29   3.7  
11_06_0128 - 20389375-20389781,20389988-20392787                       29   4.9  
09_02_0420 + 9051728-9051754,9053244-9053530,9055263-9055500,905...    29   6.5  
11_01_0401 - 3020606-3020932,3021480-3021626,3021711-3021878,302...    28   8.6  
07_01_0451 - 3404749-3405171,3405444-3405599,3405711-3406583,340...    28   8.6  
06_01_0587 - 4211917-4212021,4212250-4212478,4213426-4213759,421...    28   8.6  

>10_06_0184 -
           11577331-11577360,11577616-11577722,11578048-11578126,
           11578213-11578299,11580935-11581207,11581298-11581447,
           11582186-11582785
          Length = 441

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 597 ALWHCERSFRSSQFVFLRRG 538
           A+WHC  +F S+ F F RRG
Sbjct: 25  AVWHCTDAFHSAAFAFRRRG 44


>03_01_0300 +
           2350232-2352274,2352349-2352669,2352752-2352838,
           2353031-2353708,2353800-2353964,2354139-2354433,
           2354581-2354795,2354885-2355190,2355269-2355332,
           2355426-2355665,2355783-2355886
          Length = 1505

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 315 KITPYHDARVVKEAAYKGMTRALDAGAKRPL 407
           ++TPY DA +V  A    ++  L  GA+RPL
Sbjct: 227 RVTPYGDAGIVSLATLSWLSPLLSVGAQRPL 257


>10_06_0183 -
           11562576-11562824,11563894-11564000,11564494-11564572,
           11564659-11564745,11570563-11570817,11570922-11571071,
           11571163-11571798
          Length = 520

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 597 ALWHCERSFRSSQFVFLRRGDQFLR 523
           A+WHC  +F  + F F RRG +  R
Sbjct: 35  AVWHCTDAFHRAAFAFRRRGTRRAR 59


>06_03_1167 + 28111923-28113218
          Length = 431

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 205 GASSTESGNLTSTSTSRRRCGNVTTYLAAGLYWPRPGRSL 324
           GASS++SG+  + +T++R  G+    +    Y   PG SL
Sbjct: 288 GASSSQSGSAAAAATAKRMAGSSKMRVIPSRYSLTPGASL 327


>11_06_0128 - 20389375-20389781,20389988-20392787
          Length = 1068

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +3

Query: 450 VAILGALEALYVPLQMRERDSTRNFSRIGLHAEEKRTENFEKIVR 584
           VAILG L  LY  L  R++++T+N S   + A   R+ +F ++ +
Sbjct: 697 VAILGILLLLYKYLNRRKKNNTKNSSETSMQAH--RSISFSQLAK 739


>09_02_0420 +
           9051728-9051754,9053244-9053530,9055263-9055500,
           9057010-9057204,9058075-9058339,9058520-9058827
          Length = 439

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +2

Query: 344 GEGSSVQRNDPCAGRRREKTFTSRSKRRRLSGRTIGSDPRSPGSVVRAPPDARERQHEEL 523
           G+G++         RRR + +    +RRR +G   G  P  PGS   +   AR RQH   
Sbjct: 290 GDGAAQTAEATRLERRRRRRWVEWRRRRRATGHPKGRQP--PGS---SGSGARARQHRRR 344

Query: 524 L 526
           L
Sbjct: 345 L 345


>11_01_0401 -
           3020606-3020932,3021480-3021626,3021711-3021878,
           3021960-3022218,3024469-3024522,3025200-3025375
          Length = 376

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -1

Query: 571 SKFSVRFSSAWRPILEKFLVLSLSRIWRGTY 479
           S+ +++FSS W  ++EK +  S +  W  T+
Sbjct: 60  SRQNLKFSSNWNDVMEKLVFFSNATNWASTF 90


>07_01_0451 -
           3404749-3405171,3405444-3405599,3405711-3406583,
           3406847-3406942
          Length = 515

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 534 GLHAEEKRTENFEKIVRNAIALERARVLARDIGGGDPERMS 656
           G + ++ + E    I+RN++ L+   +  R I   DP RM+
Sbjct: 411 GFYGQKDQLELAHHILRNSVVLQAMNIDPRPIAACDPSRMA 451


>06_01_0587 -
           4211917-4212021,4212250-4212478,4213426-4213759,
           4215116-4215186,4215374-4215493,4216353-4216771,
           4216885-4217336,4217434-4217812
          Length = 702

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 436 RTDNW*RSSEPWKRCTCPSRCERETARGTSQELVS 540
           +T+N    SE W+ C   ++C+    RGT  ++V+
Sbjct: 444 KTENSEGCSEQWQHCIAVAQCQALDFRGTGWDMVA 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,335,978
Number of Sequences: 37544
Number of extensions: 534980
Number of successful extensions: 1699
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)