Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M17
         (889 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.76 
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    25   3.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    25   3.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    25   3.1  
AY062193-1|AAL58554.1|  151|Anopheles gambiae cytochrome P450 CY...    24   5.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   7.1  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.4  
AY062196-1|AAL58557.1|  151|Anopheles gambiae cytochrome P450 CY...    23   9.4  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   9.4  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
 Frame = -1

Query: 697  PLKVDFRCSAIFIGLI---LSGSPPPMSLASTRARSSAMAL 584
            PLK D+R S+ +IGL+   ++G+  P ++AS+ A    M L
Sbjct: 2763 PLKWDWRSSSTWIGLLTGAVTGASIPFNMASSVAFFVGMGL 2803


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 591 IALERARVLARDIGGGDPERMSPIKIA 671
           +A+   R++AR + GG  ERM    +A
Sbjct: 375 VAIHAGRIIARRLFGGSEERMDYADVA 401


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 591 IALERARVLARDIGGGDPERMSPIKIA 671
           +A+   R++AR + GG  ERM    +A
Sbjct: 351 VAIHAGRIIARRLFGGSEERMDYADVA 377


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 591 IALERARVLARDIGGGDPERMSPIKIA 671
           +A+   R++AR + GG  ERM    +A
Sbjct: 348 VAIHAGRIIARRLFGGSEERMDYADVA 374


>AY062193-1|AAL58554.1|  151|Anopheles gambiae cytochrome P450
           CYP4D15 protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 370 IPLYAASFTTLASW*GVIFPVGANIILPP 284
           +PL+           G IFP G+N+I+ P
Sbjct: 75  VPLFGRKMLQNTEINGKIFPAGSNVIVLP 103


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = -3

Query: 377  TGHSFVRCFLHHPSVVVRSDLPGRGQYNPAARYVV 273
            +GH F R  LH    V     P  G  N  A + +
Sbjct: 899  SGHGFFRSHLHRMGYVPSPVCPACGDENQTAEHTI 933


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 17/62 (27%), Positives = 23/62 (37%)
 Frame = +2

Query: 365  RNDPCAGRRREKTFTSRSKRRRLSGRTIGSDPRSPGSVVRAPPDARERQHEELLKNWSPR 544
            RN   A RR  +    R +R R        +P    S      + RE  H E  +   P+
Sbjct: 1059 RNQVIAARRERRNARRRERRAR-EREAQQQNPSLVFSASSEATEGRESAHPERREQVRPQ 1117

Query: 545  RR 550
            RR
Sbjct: 1118 RR 1119


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -2

Query: 483 RTTLPGLRGSLPIVRPESRRRFERLVKVFSRR-RP 382
           R T+P  R +     PE RRR   + +   RR RP
Sbjct: 474 RRTIPPTRVAAAAAAPEGRRRRRAIARARRRRCRP 508


>AY062196-1|AAL58557.1|  151|Anopheles gambiae cytochrome P450
           CYP4D17 protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 370 IPLYAASFTTLASW*GVIFPVGANIILPP 284
           +P+        A   G I P GAN+I+ P
Sbjct: 75  VPMIGRKMQQTAEINGKIIPAGANLIIMP 103


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 350 LHHPSVVVRSDL 315
           LHHPS+V ++DL
Sbjct: 275 LHHPSIVSQNDL 286


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,011
Number of Sequences: 2352
Number of extensions: 19120
Number of successful extensions: 84
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)