Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M17
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    24   1.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    24   1.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    24   1.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    24   1.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    24   1.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   2.1  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    23   4.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    23   4.9  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 48  DNVINDRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 212
           D    +R K P +   L  N +  +N  + +Y  +   I Y E++ VP+P + G+F
Sbjct: 69  DRTERERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 48  DNVINDRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 212
           D    +R K P +   L  N +  +N  + +Y  +   I Y E++ VP+P + G+F
Sbjct: 69  DRTERERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 48  DNVINDRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 212
           D    +R K P +   L  N +  +N  + +Y  +   I Y E++ VP+P + G+F
Sbjct: 69  DRTERERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 48  DNVINDRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 212
           D    +R K P +   L  N +  +N  + +Y  +   I Y E++ VP+P + G+F
Sbjct: 69  DRTERERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 48  DNVINDRPKMPFVEYKLYENIFIETNLQSADYDAVIL-ILYPEELNVPLPRHIGSF 212
           D    +R K P +   L  N +  +N  + +Y  +   I Y E++ VP+P + G+F
Sbjct: 69  DRTERERSKEPKIISSLSNN-YNYSNYNNNNYKQLCYNINYIEQIPVPVPVYYGNF 123


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +3

Query: 81  FVEYKLYENIFIETNLQSADYDAVILILYPEELNVPLPRHIGSFVD-GIGKLDKHIHKSA 257
           F+E +    + +    QS + + ++L + PE + V + + +G+ +D    K+    H++ 
Sbjct: 213 FLETRQSLEVQLVIEEQSTEQERLLLSVLPEHVAVKMRQDLGASLDTQFKKIYMSRHENV 272

Query: 258 TVWQCDYV 281
           ++   D V
Sbjct: 273 SILYADIV 280


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 465 LRGSLPIVRPESRRRFERLVKVFSRRRPAHGS 370
           LRG+ P   PE  R+ ++++    R  P   S
Sbjct: 76  LRGACPQCSPEETRQIKKVLSHIQRTYPKEWS 107


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 465 LRGSLPIVRPESRRRFERLVKVFSRRRPAHGS 370
           LRG+ P   PE  R+ ++++    R  P   S
Sbjct: 76  LRGACPQCSPEETRQIKKVLSHIQRTYPKEWS 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,240
Number of Sequences: 438
Number of extensions: 5377
Number of successful extensions: 63
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)