Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M13
(920 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 110 6e-23
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 90 6e-17
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 82 2e-14
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 51 5e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 42 0.022
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.051
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.089
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 37 0.83
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.9
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.9
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.9
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 110 bits (264), Expect = 6e-23
Identities = 65/109 (59%), Positives = 70/109 (64%)
Frame = +2
Query: 353 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 532
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 533 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 679
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APS
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPS 122
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 90.2 bits (214), Expect = 6e-17
Identities = 47/64 (73%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = +2
Query: 521 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSXR---SP 691
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 692 CXRP 703
C P
Sbjct: 62 CRLP 65
Score = 42.7 bits (96), Expect = 0.013
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +1
Query: 721 TXSAFSPLREAWRFLIAHAVGISXRC 798
T FS LREAWRFLIAHAVGIS RC
Sbjct: 67 TCPPFS-LREAWRFLIAHAVGISVRC 91
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 82.2 bits (194), Expect = 2e-14
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +2
Query: 539 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPS 679
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APS
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPS 90
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 529 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 416
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 329 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 496
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 428 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 601
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 602 IDAQVRGGETRQDYKDTRRFPLEAPS 679
I Q + +T+ +YK T FPL++PS
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPS 107
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 132 DPDMIRYIDEFGQTTTRMQ 188
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 448 HSKAVIRLSTESGDNAGKNM 507
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 41.9 bits (94), Expect = 0.022
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3
Query: 735 FSPSGSVALSHSSRCRYLXSV 797
F PSGSVALSHSSRCRYL SV
Sbjct: 17 FLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.051
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 327 SALMNRPTRGERRFAYW 377
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.089
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 399 ERGSGRAPNTQTASPRALADSLMQ 328
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 36.7 bits (81), Expect = 0.83
Identities = 27/61 (44%), Positives = 28/61 (45%)
Frame = -3
Query: 795 PX*DTYSVSYEKAPRFPXXXXXXXXXXXXGQGRXXGERXEGASRGKRLVSL*SCRVSPPL 616
P DT SVSYEKAPRFP QGR EGA+ K SL PPL
Sbjct: 41 PSRDTSSVSYEKAPRFPKGKKAEQVSGKR-QGRNR-RAHEGAAGEKSPASLSPVGFRPPL 98
Query: 615 T 613
T
Sbjct: 99 T 99
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 538 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 416
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 210 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 377
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.9
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 290 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 126
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,202,420
Number of Sequences: 1657284
Number of extensions: 12859261
Number of successful extensions: 31877
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 30582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31863
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84441173866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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