Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M12
(998 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;... 75 3e-12
UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78; H... 72 3e-11
UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214; ... 71 5e-11
UniRef50_Q30IA8 Cluster: Cytochrome c oxidase subunit 2; n=3; Di... 63 1e-08
UniRef50_A5YPB3 Cluster: Cytochrome c oxidase subunit 2; n=2; Te... 58 3e-07
UniRef50_P00405 Cluster: Cytochrome c oxidase subunit 2; n=1386;... 57 8e-07
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 56 1e-06
UniRef50_Q37545 Cluster: Cytochrome c oxidase subunit 2; n=58; r... 54 4e-06
UniRef50_Q9B4Q4 Cluster: Cytochrome c oxidase subunit 2; n=153; ... 53 1e-05
UniRef50_Q8HIN6 Cluster: Cytochrome c oxidase subunit 2; n=4; As... 52 2e-05
UniRef50_Q2HJL3 Cluster: Cytochrome c oxidase subunit 2; n=10; P... 50 7e-05
UniRef50_Q9TA26 Cluster: Cytochrome c oxidase subunit 2; n=147; ... 50 9e-05
UniRef50_Q9XMZ4 Cluster: Cytochrome c oxidase subunit 2; n=16; N... 50 1e-04
UniRef50_P05490 Cluster: Cytochrome c oxidase subunit 2; n=31; M... 50 1e-04
UniRef50_Q9MGB5 Cluster: Cytochrome c oxidase subunit 2; n=91; E... 48 3e-04
UniRef50_Q8HN46 Cluster: Cytochrome c oxidase subunit 2; n=5; On... 48 4e-04
UniRef50_Q9T6E1 Cluster: Cytochrome c oxidase subunit 2; n=12; A... 48 5e-04
UniRef50_P24894 Cluster: Cytochrome c oxidase subunit 2; n=51; C... 47 7e-04
UniRef50_O21346 Cluster: Cytochrome c oxidase subunit 2; n=6; Pr... 47 9e-04
UniRef50_P00403 Cluster: Cytochrome c oxidase subunit 2; n=3453;... 47 9e-04
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 46 0.002
UniRef50_Q4ULU3 Cluster: Probable cytochrome c oxidase subunit 2... 46 0.002
UniRef50_P48889 Cluster: Cytochrome c oxidase subunit 2; n=232; ... 46 0.002
UniRef50_Q8SHP9 Cluster: Cytochrome c oxidase subunit 2; n=83; E... 46 0.002
UniRef50_Q6Y409 Cluster: Cytochrome c oxidase subunit 2; n=2; Co... 45 0.003
UniRef50_Q9T7K8 Cluster: Cytochrome c oxidase subunit 2; n=2; Cr... 43 0.014
UniRef50_Q9B8A2 Cluster: Cytochrome c oxidase subunit 2; n=2; Bi... 43 0.014
UniRef50_P20387 Cluster: Cytochrome c oxidase subunit 2 precurso... 42 0.019
UniRef50_Q35646 Cluster: Cytochrome c oxidase subunit 2; n=1; Pe... 42 0.025
UniRef50_P00410 Cluster: Cytochrome c oxidase subunit 2 precurso... 42 0.025
UniRef50_Q02212 Cluster: Cytochrome c oxidase subunit 2; n=779; ... 42 0.025
UniRef50_Q73I77 Cluster: Cytochrome c oxidase subunit 2; n=4; Wo... 42 0.033
UniRef50_Q06Y85 Cluster: Cytochrome c oxidase subunit 2; n=3; As... 41 0.043
UniRef50_P21534 Cluster: Cytochrome c oxidase subunit 2; n=88; E... 40 0.100
UniRef50_Q09QS9 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 39 0.17
UniRef50_Q6J977 Cluster: Cytochrome c oxidase subunit 2; n=4; En... 39 0.23
UniRef50_Q6E0W2 Cluster: Cytochrome c oxidase subunit 2; n=59; C... 39 0.23
UniRef50_A5G0I4 Cluster: Cytochrome c oxidase, subunit II precur... 38 0.31
UniRef50_Q9T6M4 Cluster: Cytochrome c oxidase subunit 2; n=7; Ch... 38 0.31
UniRef50_Q5P9Z0 Cluster: Cytochrome c oxidase subunit 2; n=7; Ri... 38 0.53
UniRef50_Q6J979 Cluster: Cytochrome c oxidase subunit 2; n=4; Ob... 36 1.2
UniRef50_Q0BPU5 Cluster: Cytochrome c oxidase subunit 2; n=1; Gr... 35 3.8
UniRef50_Q2W5A1 Cluster: Cytochrome c oxidase subunit 2; n=3; Ma... 34 6.6
UniRef50_A3VPG7 Cluster: Cytochrome c oxidase subunit 2; n=1; Pa... 34 6.6
UniRef50_Q06SA7 Cluster: Cytochrome c oxidase subunit 2; n=1; Ac... 33 8.7
>UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;
Metazoa|Rep: Cytochrome c oxidase subunit 2 - Drosophila
melanogaster (Fruit fly)
Length = 228
Score = 74.9 bits (176), Expect = 3e-12
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSDFNN EFDSY+IP+NE+ + FRL DVDNR LP N+QIR
Sbjct: 102 HQWYWSYEYSDFNNIEFDSYMIPTNELMTDGFRLLDVDNRVVLPMNSQIR 151
>UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78;
Hexapoda|Rep: Cytochrome c oxidase subunit 2 - Cheilosia
urbana
Length = 227
Score = 71.7 bits (168), Expect = 3e-11
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSDF N EFDSY+IPSNE++ FRL DVDNR LP N+QIR
Sbjct: 102 HQWYWSYEYSDFINIEFDSYMIPSNELEIYNFRLLDVDNRIILPMNHQIR 151
>UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214;
Mandibulata|Rep: Cytochrome c oxidase subunit 2 -
Hypoderma lineatum (Early cattle grub) (Common cattle
grub)
Length = 226
Score = 70.9 bits (166), Expect = 5e-11
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSDF N EFDSY+IP+N++ N FRL DVDNR P N Q+R
Sbjct: 102 HQWYWSYEYSDFTNIEFDSYMIPTNDLSMNNFRLLDVDNRVITPMNTQVR 151
>UniRef50_Q30IA8 Cluster: Cytochrome c oxidase subunit 2; n=3;
Dichroplini|Rep: Cytochrome c oxidase subunit 2 -
Atrachelacris olivaceus
Length = 123
Score = 62.9 bits (146), Expect = 1e-08
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +3
Query: 552 Y*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
Y YEYSDF N EFD+Y+ P N+++N+ FRL VDNR LP N ++R
Sbjct: 36 YWSYEYSDFVNVEFDTYMTPENDLENBGFRLLXVDNRTILPMNTEVR 82
>UniRef50_A5YPB3 Cluster: Cytochrome c oxidase subunit 2; n=2;
Tettigoniinae|Rep: Cytochrome c oxidase subunit 2 -
Paratlanticus ussuriensis
Length = 179
Score = 58.4 bits (135), Expect = 3e-07
Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNX-EFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEY+DF EFDSY++P +E N FRL DVDNR LP N IR
Sbjct: 91 HQWYWSYEYADFTTPHEFDSYMLPYDEAPENGFRLLDVDNRTILPMNTPIR 141
>UniRef50_P00405 Cluster: Cytochrome c oxidase subunit 2; n=1386;
Coelomata|Rep: Cytochrome c oxidase subunit 2 - Mus
musculus (Mouse)
Length = 227
Score = 56.8 bits (131), Expect = 8e-07
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEY+D+ + FDSY+IP+N++K E RL +VDNR LP IR
Sbjct: 102 HQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIR 151
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 56.4 bits (130), Expect = 1e-06
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEY+DF N EFDSY+I +N++ N FRL +VDNR LP + IR
Sbjct: 94 HQWYWTYEYTDFKNLEFDSYLINNNQLFN--FRLLEVDNRTILPYLSHIR 141
>UniRef50_Q37545 Cluster: Cytochrome c oxidase subunit 2; n=58;
root|Rep: Cytochrome c oxidase subunit 2 - Lumbricus
terrestris (Common earthworm)
Length = 228
Score = 54.4 bits (125), Expect = 4e-06
Identities = 22/50 (44%), Positives = 34/50 (68%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEY+DF N E DSY++P++++ ++RL +VDNR +P +IR
Sbjct: 102 HQWYWSYEYTDFLNVEMDSYMLPTSDLLPGDYRLLEVDNRMVVPMQLEIR 151
>UniRef50_Q9B4Q4 Cluster: Cytochrome c oxidase subunit 2; n=153;
Neoptera|Rep: Cytochrome c oxidase subunit 2 - Diadasia
afflicta
Length = 189
Score = 53.2 bits (122), Expect = 1e-05
Identities = 28/61 (45%), Positives = 33/61 (54%)
Frame = +3
Query: 510 LTHYLRXXXSLHHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQI 689
L Y H + YEY +FNN EFDSY+I +N NN FRL D DNR +P I
Sbjct: 91 LNPYFTIKAISHQWFWSYEYPEFNNIEFDSYMI-NNFNNNNFFRLLDTDNRLIIPTKIPI 149
Query: 690 R 692
R
Sbjct: 150 R 150
>UniRef50_Q8HIN6 Cluster: Cytochrome c oxidase subunit 2; n=4;
Ascidiacea|Rep: Cytochrome c oxidase subunit 2 - Ciona
intestinalis (Transparent sea squirt)
Length = 229
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YE DFN+ + SY++PS +++ +FRL +VDN LP + IR
Sbjct: 102 HQWYWSYEGGDFNDFDMSSYMVPSEDLQEGQFRLLEVDNSMVLPYSTNIR 151
>UniRef50_Q2HJL3 Cluster: Cytochrome c oxidase subunit 2; n=10;
Protostomia|Rep: Cytochrome c oxidase subunit 2 -
Campanulotes bidentatus compar (small pigeon louse)
Length = 241
Score = 50.4 bits (115), Expect = 7e-05
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIRXY 698
H Y YEY D ++ FDSY+IP+ ++ +FRL +VD +P N++ R +
Sbjct: 117 HQWYWSYEYEDLSSSSFDSYMIPTCDLLKGDFRLLEVDKSVKVPLNSESRVF 168
>UniRef50_Q9TA26 Cluster: Cytochrome c oxidase subunit 2; n=147;
Coelomata|Rep: Cytochrome c oxidase subunit 2 -
Loxodonta africana (African elephant)
Length = 228
Score = 50.0 bits (114), Expect = 9e-05
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H + YEY+D+ + FDSY+I ++ +K E RL +VDNR LP + +R
Sbjct: 102 HQWFWSYEYTDYEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVR 151
>UniRef50_Q9XMZ4 Cluster: Cytochrome c oxidase subunit 2; n=16;
Neoptera|Rep: Cytochrome c oxidase subunit 2 - Stomaphis
pini
Length = 220
Score = 49.6 bits (113), Expect = 1e-04
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSDF N EF+S +I N FRL +VDN+ LP N IR
Sbjct: 102 HQWYWSYEYSDFLNIEFESXMI--NNFNKENFRLIEVDNKTILPFNFNIR 149
>UniRef50_P05490 Cluster: Cytochrome c oxidase subunit 2; n=31;
Magnoliophyta|Rep: Cytochrome c oxidase subunit 2 -
Oenothera bertiana (Bertero's evening primrose)
Length = 258
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXE-----FDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIRXYNYX 707
H Y YEYSD+N+ + FDSY+IP ++++ + RL +VDNR +P +R
Sbjct: 123 HQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEVDNRVVVPVKTNLRLIVTS 182
Query: 708 KPM*FHSMETTSFXLXC 758
+ HS S + C
Sbjct: 183 ADV-LHSWAVPSLGVKC 198
>UniRef50_Q9MGB5 Cluster: Cytochrome c oxidase subunit 2; n=91;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Chrysodidymus synuroideus
Length = 273
Score = 48.4 bits (110), Expect = 3e-04
Identities = 27/56 (48%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +3
Query: 543 HHXY*XYEYSDFN---NXE---FDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSDF+ N E FDSY++ SN++ FRL +VDNR LP IR
Sbjct: 139 HQWYWTYEYSDFSSMTNGESINFDSYMVSSNDLIKGGFRLLEVDNRVILPVLTHIR 194
>UniRef50_Q8HN46 Cluster: Cytochrome c oxidase subunit 2; n=5;
Onchocercidae|Rep: Cytochrome c oxidase subunit 2 -
Brugia malayi (Filarial nematode worm)
Length = 232
Score = 48.0 bits (109), Expect = 4e-04
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIRXY 698
H Y YEY D ++ FDS++ P +++ +FRL DVDNR LP I Y
Sbjct: 105 HQWYWSYEYGDDSSLVFDSFMKPVDDLSLGDFRLFDVDNRCVLPIGVNIGLY 156
>UniRef50_Q9T6E1 Cluster: Cytochrome c oxidase subunit 2; n=12;
Agathis sp. DMA-1998|Rep: Cytochrome c oxidase subunit 2
- Agathis sp. DMA-1998
Length = 185
Score = 47.6 bits (108), Expect = 5e-04
Identities = 25/47 (53%), Positives = 30/47 (63%)
Frame = +3
Query: 552 Y*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
Y YEYSDFN FDS+++ + K + FRL DVDNR LP N IR
Sbjct: 104 YWSYEYSDFNEINFDSFMLKDFK-KIDLFRLLDVDNRLILPYNYFIR 149
>UniRef50_P24894 Cluster: Cytochrome c oxidase subunit 2; n=51;
Chromadorea|Rep: Cytochrome c oxidase subunit 2 -
Caenorhabditis elegans
Length = 231
Score = 47.2 bits (107), Expect = 7e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSD EFDSY+ +++ E RL +VDNR +P + IR
Sbjct: 105 HQWYWSYEYSDIPGLEFDSYMKSLDQLSLGEPRLLEVDNRCVIPCDTNIR 154
>UniRef50_O21346 Cluster: Cytochrome c oxidase subunit 2; n=6;
Protostomia|Rep: Cytochrome c oxidase subunit 2 -
Euhadra herklotsi
Length = 227
Score = 46.8 bits (106), Expect = 9e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXN 680
H Y YE N ++DSY+ P+++++ E+RL +VDNR LP N
Sbjct: 103 HQWYWSYESPFLENKQYDSYMTPTSDLQPGEYRLLEVDNRVVLPSN 148
>UniRef50_P00403 Cluster: Cytochrome c oxidase subunit 2; n=3453;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 - Homo
sapiens (Human)
Length = 227
Score = 46.8 bits (106), Expect = 9e-04
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEY+D+ F+SY++P ++ + RL DVDNR LP IR
Sbjct: 102 HQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIR 151
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 46.0 bits (104), Expect = 0.002
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNX-----EFDSYIIPSNEIKNNEFRLSDVDNRXXLP 674
H Y YEY DF N EFDSY++P ++++ R+ +VDNR LP
Sbjct: 660 HQWYWSYEYPDFLNSDGDFVEFDSYLVPESDLEEGALRMLEVDNRVILP 708
>UniRef50_Q4ULU3 Cluster: Probable cytochrome c oxidase subunit 2;
n=13; cellular organisms|Rep: Probable cytochrome c
oxidase subunit 2 - Rickettsia felis (Rickettsia azadi)
Length = 315
Score = 46.0 bits (104), Expect = 0.002
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
+ Y Y Y D +N EFDS +I +K ++ RL DVDNR +P N +R
Sbjct: 176 YQWYWHYIYPDHDNLEFDSVMISDENLKPDQKRLLDVDNRIVIPENATVR 225
>UniRef50_P48889 Cluster: Cytochrome c oxidase subunit 2; n=232;
Coelomata|Rep: Cytochrome c oxidase subunit 2 -
Albinaria coerulea (Land snail)
Length = 224
Score = 46.0 bits (104), Expect = 0.002
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLP 674
H Y YE N FDSY+IP ++K ++RL +VDNR +P
Sbjct: 102 HQWYWSYEMPSMNISNFDSYMIPEEDLKPGDYRLLEVDNRPMVP 145
>UniRef50_Q8SHP9 Cluster: Cytochrome c oxidase subunit 2; n=83;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Trichoderma reesei (Hypocrea jecorina)
Length = 540
Score = 45.6 bits (103), Expect = 0.002
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = +3
Query: 540 LHHXY*XYEYSDFNNX-----EFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
LH Y Y+Y DF + EFDSYI+P ++++ R+ +VDNR +P IR
Sbjct: 410 LHQWYWSYQYPDFIDSNEEFIEFDSYIVPDSDLEEGGLRMLEVDNRVIVPELTHIR 465
>UniRef50_Q6Y409 Cluster: Cytochrome c oxidase subunit 2; n=2;
Coelomata|Rep: Cytochrome c oxidase subunit 2 - Ophiura
lutkeni
Length = 237
Score = 45.2 bits (102), Expect = 0.003
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEF-RLSDVDNRXXLPXNNQIRXYNY 704
H Y YE D N EFDSY+I + + RL +VDNR LP N IR Y
Sbjct: 102 HQWYWTYEIWDNNRIEFDSYMIHLEDFQQEGLPRLLEVDNRLVLPYNTDIRVITY 156
>UniRef50_Q9T7K8 Cluster: Cytochrome c oxidase subunit 2; n=2;
Crassostrea|Rep: Cytochrome c oxidase subunit 2 -
Crassostrea gigas (Pacific oyster) (Crassostrea
angulata)
Length = 233
Score = 42.7 bits (96), Expect = 0.014
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLP 674
H Y YEY+DF ++SY++P +E+K E RL VD LP
Sbjct: 102 HQWYWEYEYTDFAVVSYNSYMVPEDELKLGEPRLLTVDKSMVLP 145
>UniRef50_Q9B8A2 Cluster: Cytochrome c oxidase subunit 2; n=2;
Bilateria|Rep: Cytochrome c oxidase subunit 2 -
Trichinella spiralis (Trichina worm)
Length = 225
Score = 42.7 bits (96), Expect = 0.014
Identities = 24/50 (48%), Positives = 28/50 (56%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y Y Y DFN EFDSY+ E ++ +FRL D DNR LP IR
Sbjct: 102 HQWYWTYNYPDFN-LEFDSYM---KEWESQDFRLLDCDNRVVLPTQVPIR 147
>UniRef50_P20387 Cluster: Cytochrome c oxidase subunit 2 precursor;
n=239; Fungi/Metazoa group|Rep: Cytochrome c oxidase
subunit 2 precursor - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 247
Score = 42.3 bits (95), Expect = 0.019
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +3
Query: 552 Y*XYEYSDFNNX-----EFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
Y YEYSDF N EF+SY+IP + +++ + RL D D +P + IR
Sbjct: 121 YWKYEYSDFINDNGETVEFESYVIPEDLLEDGQLRLLDTDTSVVVPVDTHIR 172
>UniRef50_Q35646 Cluster: Cytochrome c oxidase subunit 2; n=1;
Petunia sp.|Rep: Cytochrome c oxidase subunit 2 -
Petunia sp. (Petunia)
Length = 379
Score = 41.9 bits (94), Expect = 0.025
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +3
Query: 561 YEYSDFNNXE-----FDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
Y YSD+N+ + FDSY IP ++ + + RL +VDNR +P N+ +R
Sbjct: 86 YGYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEVDNRVVVPANSSLR 134
>UniRef50_P00410 Cluster: Cytochrome c oxidase subunit 2 precursor;
n=745; Eukaryota|Rep: Cytochrome c oxidase subunit 2
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 251
Score = 41.9 bits (94), Expect = 0.025
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNX-----EFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
+ Y YEYSDF N EF+SY+IP ++ + RL D D +P + IR
Sbjct: 122 YQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIR 176
>UniRef50_Q02212 Cluster: Cytochrome c oxidase subunit 2; n=779;
root|Rep: Cytochrome c oxidase subunit 2 - Phytophthora
megasperma (Potato pink rot fungus)
Length = 266
Score = 41.9 bits (94), Expect = 0.025
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Frame = +3
Query: 552 Y*XYEYSD---FNNXE--FDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
Y YEYSD F++ FDSY+I +++ +FR+ +VDNR +P N+ IR
Sbjct: 125 YWSYEYSDNLEFSDEPLIFDSYMIQEDDLAIGQFRILEVDNRVVVPTNSHIR 176
>UniRef50_Q73I77 Cluster: Cytochrome c oxidase subunit 2; n=4;
Wolbachia|Rep: Cytochrome c oxidase subunit 2 -
Wolbachia pipientis wMel
Length = 254
Score = 41.5 bits (93), Expect = 0.033
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y Y+Y ++ FDSYI + + +L VDN LP N +R
Sbjct: 126 HQWYWSYQYPEYQGVSFDSYIKGKEDFIEGDLKLFSVDNNIILPVNTNVR 175
>UniRef50_Q06Y85 Cluster: Cytochrome c oxidase subunit 2; n=3;
Ascomycota|Rep: Cytochrome c oxidase subunit 2 -
Trigonopsis vinaria
Length = 171
Score = 41.1 bits (92), Expect = 0.043
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = +3
Query: 561 YEYSDFNNXE-----FDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQI 689
YEYSDF N FDSYI + ++ E RL DVDNR +P I
Sbjct: 81 YEYSDFINQNYETMGFDSYIKAEDMLETGELRLLDVDNRLIIPTETNI 128
>UniRef50_P21534 Cluster: Cytochrome c oxidase subunit 2; n=88;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 248
Score = 39.9 bits (89), Expect = 0.100
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 561 YEYSDFNNXE-----FDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIRXYNYXKPM*FH 725
YE +DF E FDSY++P +++ R +VDNR LP + +IR + H
Sbjct: 124 YELNDFVTNENEPVSFDSYMVPEEDLEEGSLRQLEVDNRLVLPIDTRIRLILTSGDV-IH 182
Query: 726 SMETTSFXLXC 758
S S + C
Sbjct: 183 SWAVPSLGIKC 193
>UniRef50_Q09QS9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Haplomitrium mnioides|Rep: Cytochrome c oxidase subunit
2 - Haplomitrium mnioides
Length = 141
Score = 39.1 bits (87), Expect = 0.17
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 546 HXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y Y SD + DSY+IP ++ ++ + RL +VDNR +P R
Sbjct: 21 HEYPDYNSSDEQSPTSDSYMIPEDDSESGQSRLLEVDNRVVVPAKTHPR 69
>UniRef50_Q6J977 Cluster: Cytochrome c oxidase subunit 2; n=4;
Endopterygota|Rep: Cytochrome c oxidase subunit 2 -
Danaus plexippus plexippus
Length = 220
Score = 38.7 bits (86), Expect = 0.23
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +3
Query: 597 SYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
SY+I + I N FRL DVDNR LP NNQIR
Sbjct: 120 SYMIQPSNINN--FRLLDVDNRIILPMNNQIR 149
>UniRef50_Q6E0W2 Cluster: Cytochrome c oxidase subunit 2; n=59;
Coelomata|Rep: Cytochrome c oxidase subunit 2 -
Paraspadella gotoi
Length = 223
Score = 38.7 bits (86), Expect = 0.23
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEYSD + EFD+Y+ +KN+ RL DNR LP +R
Sbjct: 106 HQWYWSYEYSDLMHKEFDAYM-----VKNSNPRLLMSDNRTILPYMTPVR 150
>UniRef50_A5G0I4 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Acidiphilium cryptum JF-5|Rep:
Cytochrome c oxidase, subunit II precursor -
Acidiphilium cryptum (strain JF-5)
Length = 316
Score = 38.3 bits (85), Expect = 0.31
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 513 TH-YLRXXXSLHHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQI 689
TH Y+ + H Y Y+Y +F SY IP N+IK + D+ LP N +I
Sbjct: 134 THRYMTVKVTGHQWYWEYDYPAAKGVDFTSYPIPDNQIKPGQIARLSADHPLVLPANEKI 193
>UniRef50_Q9T6M4 Cluster: Cytochrome c oxidase subunit 2; n=7;
Chromadorea|Rep: Cytochrome c oxidase subunit 2 -
Globodera pallida
Length = 237
Score = 38.3 bits (85), Expect = 0.31
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLP 674
H Y YE D FDSY++ + +FRL +VDNR LP
Sbjct: 104 HQWYWSYELGDSLGLSFDSYMVFEDSFFLGDFRLLEVDNRLVLP 147
>UniRef50_Q5P9Z0 Cluster: Cytochrome c oxidase subunit 2; n=7;
Rickettsiales|Rep: Cytochrome c oxidase subunit 2 -
Anaplasma marginale (strain St. Maries)
Length = 276
Score = 37.5 bits (83), Expect = 0.53
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLP 674
+ Y Y Y + FDSY+ P +E+++ E RL +VDNR +P
Sbjct: 149 YQWYWTYVYPE-TGIRFDSYMKPDSELESGELRLLEVDNRMVVP 191
>UniRef50_Q6J979 Cluster: Cytochrome c oxidase subunit 2; n=4;
Obtectomera|Rep: Cytochrome c oxidase subunit 2 - Danaus
plexippus plexippus
Length = 221
Score = 36.3 bits (80), Expect = 1.2
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3
Query: 630 NEFRLSDVDNRXXLPXNNQIR 692
N FRL DVDNR LP NNQIR
Sbjct: 130 NNFRLLDVDNRIILPMNNQIR 150
>UniRef50_Q0BPU5 Cluster: Cytochrome c oxidase subunit 2; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Cytochrome c
oxidase subunit 2 - Granulobacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1)
Length = 300
Score = 34.7 bits (76), Expect = 3.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y Y Y D +S +I ++K ++ RL VDN+ +P +R
Sbjct: 151 HQWYWEYGYPDNGIDSIESRVIQDGDLKPDQIRLLSVDNQVVVPYGKNVR 200
>UniRef50_Q2W5A1 Cluster: Cytochrome c oxidase subunit 2; n=3;
Magnetospirillum|Rep: Cytochrome c oxidase subunit 2 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 293
Score = 33.9 bits (74), Expect = 6.6
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIR 692
H Y YEY D ++ +FDS ++ + ++K + RL DN +P IR
Sbjct: 144 HQWYWTYEYPD-HDFKFDSNMVQAEDLKPGQPRLLTADNTLVVPAGVPIR 192
>UniRef50_A3VPG7 Cluster: Cytochrome c oxidase subunit 2; n=1;
Parvularcula bermudensis HTCC2503|Rep: Cytochrome c
oxidase subunit 2 - Parvularcula bermudensis HTCC2503
Length = 392
Score = 33.9 bits (74), Expect = 6.6
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 561 YEYSDFNNXEFDSYIIPSNEIKNNEFRLSDVDNRXXLPXNNQIRXYNYXKPM*FHSMETT 740
Y Y DF + EFD+ + P + + +N +RL+ N +P IR + + HS
Sbjct: 248 YVYPDFGDFEFDALMAPKDSVPSNLYRLA-TTNDVVVPAGETIRIATVGRDV-IHSWAMP 305
Query: 741 SFXL 752
+F +
Sbjct: 306 AFGI 309
>UniRef50_Q06SA7 Cluster: Cytochrome c oxidase subunit 2; n=1;
Acanthocardia tuberculata|Rep: Cytochrome c oxidase
subunit 2 - Acanthocardia tuberculata (tuberculate
cockle)
Length = 240
Score = 33.5 bits (73), Expect = 8.7
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +3
Query: 543 HHXY*XYEYSDFNNX-EFDSYIIPS---NEIKNNEFRLSDVDNRXXLPXNNQIRXYNYXK 710
H Y YEY ++ ++SY++P+ NE F+ DVD R LP + IR +
Sbjct: 109 HQWYWQYEYQQGSDELVYESYLLPAEEANERGGGMFQYMDVDKRCVLPSDKLIRVLFTSE 168
Query: 711 PM*FHSMETTSFXL 752
+ HS SF L
Sbjct: 169 DV-IHSWFIPSFGL 181
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,380,210
Number of Sequences: 1657284
Number of extensions: 5593574
Number of successful extensions: 6661
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 6427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6635
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 94306056537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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