Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M11
         (881 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       27   1.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   4.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   4.0  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.3  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +2

Query: 323 EQTGKCQRNISTSERVDRCQTGLQCTPKSCQRIYKK 430
           +++GK Q+NIS S++  + +T  + TP    ++ K+
Sbjct: 11  KKSGKAQKNISKSDKKKKRKTRKRATPIYIYKVLKQ 46


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
 Frame = +3

Query: 105 DNFFKTLDDKIEKEQQQLKA-SRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVC 281
           +N+ K   +K E  ++Q K    +KT     L ++ ++  ELS+ +     R  EL +  
Sbjct: 429 ENYKKIESEKNEALKRQEKLIDHIKTS-RLGLEEQKRIKAELSQDVGTSKERIHELQSEL 487

Query: 282 ASLQSCLTIADSDKN---RLENAKETYQLVK-ELTGV 380
            +++  L  A  DK+   R +  +E  +L K E+ GV
Sbjct: 488 DNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGV 524


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +3

Query: 180 ELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLTIADSDKNRLENAKETYQL 359
           E   K  +  K   +L+E  AE   R   L+         +T A  ++   +   + Y+L
Sbjct: 657 EKSQKSGEGVKTSAKLAEEAAERRERMERLE--------AMTTAQIEQENTQMINDLYRL 708

Query: 360 VKELTGVR 383
           +K+ TG+R
Sbjct: 709 LKKYTGLR 716


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +3

Query: 180 ELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLTIADSDKNRLENAKETYQL 359
           E   K  +  K   +L+E  AE   R   L+         +T A  ++   +   + Y+L
Sbjct: 657 EKSQKSGEGVKTSAKLAEEAAERRERMERLE--------AMTTAQIEQENTQMINDLYRL 708

Query: 360 VKELTGVR 383
           +K+ TG+R
Sbjct: 709 LKKYTGLR 716


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/40 (22%), Positives = 22/40 (55%)
 Frame = +3

Query: 141  KEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRS 260
            +E+ +++    + E E +  +  ++HNE +    + +RRS
Sbjct: 1090 REEAEIQQQLQREEDERRTEERRQLHNEANRAYRQRNRRS 1129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,540
Number of Sequences: 2352
Number of extensions: 13198
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)