Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M11
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 33 0.20
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 33 0.36
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 33 0.36
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 32 0.47
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 31 1.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 31 1.4
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.9
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 29 4.4
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 4.4
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 4.4
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 4.4
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 29 5.8
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 5.8
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 5.8
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 29 5.8
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 5.8
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 29 5.8
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 7.7
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 7.7
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 28 7.7
Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 28 7.7
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 7.7
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 7.7
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 7.7
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +3
Query: 111 FFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGEL-DNVCAS 287
F + + +E+ + +M +L TK+ E K L ER AEL+ +SG+L + + ++
Sbjct: 23 FLRQSNQLVERNMINTEGRKMLAKLLTKMVSEAKGIYALDERRAELA-KSGKLQEKLKSA 81
Query: 288 LQSCLTIADSDKNRLENAKETYQLVKELT 374
Q+ LT+ + + E +++ + K+LT
Sbjct: 82 YQTSLTVMEDRLHIAELSRQVQE--KKLT 108
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +3
Query: 102 IDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELD 272
ID+F KT DKI+++Q++ +A R + + K A E K+ + E ++ +LD
Sbjct: 134 IDDFVKTFTDKIKQKQEEKEAQRQEQIEKWKQASE-KLQQQREELKQQIDAAKQKLD 189
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily assigned
gene nameprotein 177 protein.
Length = 1667
Score = 32.7 bits (71), Expect = 0.36
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +3
Query: 84 PVLIDNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSR-RS 260
P ++ +N + K +K++++ K ++ K E++ + E EL E L + + +
Sbjct: 984 PCIVLKNENLMNEVTKKKKKKEKENKKNKGKKEIKREEKVEFICVPELKESLENIVKIQD 1043
Query: 261 GELDNVCASL--QSCLTIADSDKNRLENAKETYQLVKE 368
EL+ ++ LTI + DKNRL + T ++V++
Sbjct: 1044 FELEQHAVDFFSETLLTIFNDDKNRLFSRDITLKIVEK 1081
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 32.3 bits (70), Expect = 0.47
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Frame = +3
Query: 207 TKVHNELSERLAELSRRSG------ELDNVCASLQSCLTIADSDKNRLENAKETYQLVKE 368
T+ H + ++ +L + G +D++ +L++ IAD DK+ LEN K++ + VK
Sbjct: 378 TETHYHMMRQVFDLQKHRGIRLTQNAIDSISNTLETKCLIADMDKSFLENMKQSAKHVKL 437
Query: 369 LTGVRLDFSAPPNLAKGYIKNESRKVLQPFEVDSADSNALWNLIQSVS 512
L + N + N+ K+ + S+D +++ +++S+S
Sbjct: 438 LLRKVQALESIRNAFTSKVINDFNKL--STQTKSSDVSSIRTVLRSLS 483
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 129 DKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLTI 308
+K++KE+++LKA K ++E + +E KV E AE + E + V A Q +
Sbjct: 896 EKVKKEEERLKAEEEKVKVEKERNKE-KVKAEEERLKAEEEKVKIEKEKVKAEEQKIKSA 954
Query: 309 ADS-DKNRLENAKE 347
+ K R E+AK+
Sbjct: 955 EEERRKERAEDAKK 968
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +3
Query: 66 NQKIGVPVLIDNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAE 245
N + + L D I K L+D+ +QQQ + E E KL + + + +L +E
Sbjct: 490 NYESTIAQLKDEIQILNKRLEDEALAQQQQKPKDEIVAESEKKLKELKERNKQLVMEKSE 549
Query: 246 LSRRSGELDNVCASLQSCL 302
+ R ELDN+ L L
Sbjct: 550 IQR---ELDNINDHLDQVL 565
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 87 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 263
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 753 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 812
Query: 264 E 266
E
Sbjct: 813 E 813
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 87 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 263
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 753 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 812
Query: 264 E 266
E
Sbjct: 813 E 813
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 87 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 263
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 513 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 572
Query: 264 E 266
E
Sbjct: 573 E 573
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 87 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 263
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 753 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 812
Query: 264 E 266
E
Sbjct: 813 E 813
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 29.1 bits (62), Expect = 4.4
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +3
Query: 111 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 269
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 270 DNVCASLQSCL-TIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 446
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 447 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 542
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 29.1 bits (62), Expect = 4.4
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +3
Query: 111 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 269
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 270 DNVCASLQSCL-TIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 446
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 447 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 542
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 29.1 bits (62), Expect = 4.4
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +3
Query: 111 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 269
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 270 DNVCASLQSCL-TIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 446
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 447 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 542
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 29.1 bits (62), Expect = 4.4
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +3
Query: 111 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 269
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 270 DNVCASLQSCL-TIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 446
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 447 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 542
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 135 IEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGEL 269
+E +Q+ ++ +MKT TKL + K++ + ++EL+ + L
Sbjct: 281 LELKQKHIEELQMKTTQITKLENDVKLNGNFMDHISELTEENHNL 325
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 138 EKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLTIADS 317
E E++ + K LE KLA +K R E++++ ++ CA L+ D
Sbjct: 916 EVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975
Query: 318 DKNRLE---NAKE 347
++E NAKE
Sbjct: 976 SLRKVEAEKNAKE 988
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 138 EKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLTIADS 317
E E++ + K LE KLA +K R E++++ ++ CA L+ D
Sbjct: 916 EVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975
Query: 318 DKNRLE---NAKE 347
++E NAKE
Sbjct: 976 SLRKVEAEKNAKE 988
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 147 QQQLKASRMKTELETKLAQETKV---HNELSERLAELSRRSGELDNVCASLQSCLTIADS 317
+ Q RMKTEL L Q T++ + EL ++L E +R L++ + D+
Sbjct: 244 EMQEALERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDA 303
Query: 318 DKNRLENAKETYQ 356
+ E T++
Sbjct: 304 QRTDQETRITTFE 316
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 28.7 bits (61), Expect = 5.8
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 138 EKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLTIADS 317
E E++ + K LE KLA +K R E++++ ++ CA L+ D
Sbjct: 916 EVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975
Query: 318 DKNRLE---NAKE 347
++E NAKE
Sbjct: 976 SLRKVEAEKNAKE 988
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 28.7 bits (61), Expect = 5.8
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 123 LDDKIEKEQQQLKASRMKTELETKLAQETKVHNEL-SERLAELSRRSGELDNVCASLQSC 299
L+ + K +QLK + K E +L + K+H E+ SERL + S + +L + S+++
Sbjct: 178 LEFQKRKSDKQLKDLQSKLERNLELVELNKLHEEVQSERLLK-SEVAEKLAELIKSVKTS 236
Query: 300 LTIADSDKNRLENAKETYQLVKELTGVRLDFS 395
++ + E+A+ + + V E +D S
Sbjct: 237 NSMLLEKTTQFEDAQGSRENVVEGANDEMDTS 268
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 147 QQQLKASRMKTELETKLAQETKV---HNELSERLAELSRRSGELDNVCASLQSCLTIADS 317
+ Q RMKTEL L Q T++ + EL ++L E +R L++ + D+
Sbjct: 244 EMQEALERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDA 303
Query: 318 DKNRLENAKETYQ 356
+ E T++
Sbjct: 304 QRTDQETRITTFE 316
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/111 (18%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Frame = +3
Query: 60 RWNQKIGVPVLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSER 236
+WN +++++DN K +D + + ++ + L +KL + + + LSE+
Sbjct: 438 QWNNIANALTILNDLDNALKAVDSFLGFRSDKASTEIVQFQSLSSKLGKLSATTSMLSEK 497
Query: 237 LAELSRRSGELDNVCASLQSCLTIADSDKNRLENAKETYQLVKELTGVRLD 389
+ ++ + N + ++D DK L+ K +++ ++L ++LD
Sbjct: 498 VKDIKVDALPTGNDVNMVSFEKLMSDMDKLSLK-LKALHKVSEKLKSLKLD 547
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 417 GYIKNESRKVLQPFEVDSADSNALWNLIQSVSGDWSDKENKP 542
G + N RKV++ V A SN+L NL+ S SG +D + P
Sbjct: 225 GLLSNSIRKVIKETGVSDALSNSLPNLLGSGSG--ADSSSAP 264
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +3
Query: 117 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 296
++L +E+ + QL R + +LE + ++ N ++ ++ +S ++ + CA LQS
Sbjct: 372 QSLKYDLERLENQL---RSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQS 428
Query: 297 CLTIADSDKNRLENAKETYQ-----LVKELTGVRLDFSAPPNLAKG---YIKNESRKVLQ 452
L A ++E +T Q L KE+ ++ N G +K E
Sbjct: 429 NLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKS 488
Query: 453 PFEVDSADSNAL 488
++ D NAL
Sbjct: 489 LADLPLLDENAL 500
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +3
Query: 117 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 296
++L +E+ + QL R + +LE + ++ N ++ ++ +S ++ + CA LQS
Sbjct: 358 QSLKYDLERLENQL---RSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQS 414
Query: 297 CLTIADSDKNRLENAKETYQ-----LVKELTGVRLDFSAPPNLAKG---YIKNESRKVLQ 452
L A ++E +T Q L KE+ ++ N G +K E
Sbjct: 415 NLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKS 474
Query: 453 PFEVDSADSNAL 488
++ D NAL
Sbjct: 475 LADLPLLDENAL 486
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +3
Query: 117 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 296
++L +E+ + QL R + +LE + ++ N ++ ++ +S ++ + CA LQS
Sbjct: 358 QSLKYDLERLENQL---RSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQS 414
Query: 297 CLTIADSDKNRLENAKETYQ-----LVKELTGVRLDFSAPPNLAKG---YIKNESRKVLQ 452
L A ++E +T Q L KE+ ++ N G +K E
Sbjct: 415 NLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKS 474
Query: 453 PFEVDSADSNAL 488
++ D NAL
Sbjct: 475 LADLPLLDENAL 486
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 417 GYIKNESRKVLQPFEVDSADSNALWNLIQSVSGDWSDKENKP 542
G + N RKV++ V A SN+L NL+ S SG +D + P
Sbjct: 225 GLLSNSIRKVIKETGVSDALSNSLPNLLGSGSG--ADSSSAP 264
>Z49907-8|CAN99663.1| 499|Caenorhabditis elegans Hypothetical
protein B0491.6b protein.
Length = 499
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 105 DNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCA 284
D F L K+EKE+ Q+ ++ ++E L +VH E AE E + C
Sbjct: 158 DTQFNNLHKKLEKERTQMFDDQVSKDVERLLNTANRVHGP-REWTAE---EKAEFTSYCR 213
Query: 285 SLQSCLTIADSDKN 326
S +S AD N
Sbjct: 214 SWRSGALGADDKLN 227
>Z49907-7|CAA90088.1| 497|Caenorhabditis elegans Hypothetical
protein B0491.6a protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +3
Query: 105 DNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCA 284
D F L K+EKE+ Q+ ++ ++E L +VH E AE E + C
Sbjct: 156 DTQFNNLHKKLEKERTQMFDDQVSKDVERLLNTANRVHGP-REWTAE---EKAEFTSYCR 211
Query: 285 SLQSCLTIADSDKN 326
S +S AD N
Sbjct: 212 SWRSGALGADDKLN 225
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 168 RMKTELETKLAQETKVHNELSER-----LAELSRRSGELDNVCASLQSCLTIADSDKNRL 332
R E K + T +H +L +R L +++ + ELD + ++S D++KN
Sbjct: 309 RAAIEFLMKENEATTIHMKLEQRRRQRYLDKIAPKQAELDKMKEEMKSIAETLDTNKNEY 368
Query: 333 ENAKETYQLVKE 368
+ ++E +++ E
Sbjct: 369 KQSEEAQKVMIE 380
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Frame = +3
Query: 99 NIDNFFKTLDDKIE--KEQQQLKAS----RMKTELETKLAQETKVHNELSERLAELSRRS 260
N+ FF+ +DD+ KE++ L +S R ++ + ++ EL+ ++S
Sbjct: 1722 NVHQFFRDIDDEESWIKEKKLLVSSDDYGRDLPGVQNLRRKHRRIDTELASHEPQVSLVK 1781
Query: 261 GELDNVCASLQSCLTIADSDKNRLENAKETYQLVKELTGVR 383
+ + + S D K R+E+ ++++ +++LTG R
Sbjct: 1782 LKGEELLRSAAEAGVGEDQIKKRMEDLEQSWGQIRDLTGNR 1822
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 219 NELSERLAELSRRSGELDNVCASLQ 293
N+L E L E++R+ E DNV ASL+
Sbjct: 105 NKLKEELEEVTRQLTESDNVIASLE 129
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 219 NELSERLAELSRRSGELDNVCASLQ 293
N+L E L E++R+ E DNV ASL+
Sbjct: 234 NKLKEELEEVTRQLTESDNVIASLE 258
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +3
Query: 96 DNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDN 275
DN+++ DKI ++ L+ + +++L L QE V ++ +L+ G DN
Sbjct: 2438 DNLNSLPAEESDKIREKINDLRRRKQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDN 2497
Query: 276 VCASLQSCLTIADSDKNR 329
+ + L +SDK R
Sbjct: 2498 L-----NSLPAEESDKIR 2510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,504,372
Number of Sequences: 27780
Number of extensions: 299596
Number of successful extensions: 1105
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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