Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M10
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 293 3e-80
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 289 5e-79
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 237 2e-63
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 224 1e-59
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 215 5e-57
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 201 9e-53
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 97 2e-21
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 90 3e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 85 1e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 85 2e-17
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 79 1e-15
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 78 2e-15
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 77 3e-15
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 77 4e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 70 4e-13
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 70 4e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 64 2e-11
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 60 3e-10
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 37 0.003
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.66
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 27 2.7
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 27 3.5
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 4.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.1
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 293 bits (718), Expect = 3e-80
Identities = 140/198 (70%), Positives = 160/198 (80%), Gaps = 9/198 (4%)
Frame = +2
Query: 125 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 304
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ VELALWDTAGQ
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQ 64
Query: 305 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 484
EDYDRLRPLSYPD+ VIL+CF+VDSPDSL+N+ EKW EV HFC ++PI+LV K DLRN
Sbjct: 65 EDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
Query: 485 DPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVXK 664
DP I EL K Q PV +EG+A+A+KI A+ YLECSAK+ EGVREVFE+ATRAA+ K
Sbjct: 125 DPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHK 184
Query: 665 ---------KKKTRCSLL 691
KKK RC LL
Sbjct: 185 PKVKPSSGTKKKKRCILL 202
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 289 bits (708), Expect = 5e-79
Identities = 135/196 (68%), Positives = 158/196 (80%), Gaps = 7/196 (3%)
Frame = +2
Query: 125 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 304
+R+KLVIVGDGACGKTCLLIVFSK FPEVYVPTVFENYVAD+EVDG+ +ELALWDTAGQ
Sbjct: 5 LRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQ 64
Query: 305 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 484
EDYDRLRPLSYPD+ V+L+CFSVD+P+SL+N+ EKW EV HFC N+PI+LVG K DLRN
Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
Query: 485 DPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVXK 664
DP TI EL K Q+P+ +EG+ +A+KI A+ YLECSAK EGV EVFETA RA++ K
Sbjct: 125 DPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAARASMLKFK 184
Query: 665 -------KKKTRCSLL 691
KKK C LL
Sbjct: 185 PASVPKTKKKKHCILL 200
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 237 bits (579), Expect = 2e-63
Identities = 111/193 (57%), Positives = 140/193 (72%), Gaps = 4/193 (2%)
Frame = +2
Query: 125 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 304
IR+KLV+VGDGACGKT LL VF+ FP YVPTVFENYV+D VDGK V+LALWDTAGQ
Sbjct: 7 IRRKLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQ 66
Query: 305 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 484
E+Y+RLRP+SY +IL+ F++DSPDSLEN+ KW E+ CPNVP ILVG K DLR+
Sbjct: 67 EEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRS 126
Query: 485 DPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQV-- 658
DP I E+R+ Q VK Q+ +A++I A Y+ECS+ + +GV +VFE ATRAAL V
Sbjct: 127 DPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVFEAATRAALTVRD 186
Query: 659 --XKKKKTRCSLL 691
K T+C ++
Sbjct: 187 SENDKSSTKCCII 199
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 224 bits (547), Expect = 1e-59
Identities = 106/171 (61%), Positives = 126/171 (73%), Gaps = 2/171 (1%)
Frame = +2
Query: 131 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEV--DGKQVELALWDTAGQ 304
KKLV+VGDG CGKTCLLIVFS FPE YVPTVFENY+ DI + K +ELALWDTAGQ
Sbjct: 15 KKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQ 74
Query: 305 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 484
E+YDRLRPLSYP+++VIL+CFS+D P SL N+ EKW PEV+HFCP PI+LVG K DLR
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRK 134
Query: 485 DPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETA 637
D LR PV Q+ +++A +NA Y+ECSAK GV EVF+ A
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNA-PYVECSAKENTGVNEVFQLA 184
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 215 bits (526), Expect = 5e-57
Identities = 98/188 (52%), Positives = 133/188 (70%), Gaps = 2/188 (1%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 313
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + + L L+DTAGQEDY
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDY 64
Query: 314 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPA 493
DRLRPLSYP TDV L+CFSV SP S EN+ EKW PEV H CP VP ++VG + DLR+DP+
Sbjct: 65 DRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLRDDPS 124
Query: 494 TINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ--VXKK 667
+L + Q P+ ++G +A ++ A Y+ECSA +++G++ VF+ A AAL V K
Sbjct: 125 VQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVFDEAIVAALDPPVPHK 184
Query: 668 KKTRCSLL 691
KK++C +L
Sbjct: 185 KKSKCLVL 192
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 201 bits (491), Expect = 9e-53
Identities = 100/176 (56%), Positives = 123/176 (69%)
Frame = +2
Query: 125 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 304
I +K+VI+GDGA GKT LL VF+K FP+VY PT+FENY+ DI VDG +EL+LWDTAGQ
Sbjct: 12 IYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQ 71
Query: 305 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 484
E+YD+LR LSY DT VI++CF+VDS DSLEN+ KW PEV CP V ++LV K DLR
Sbjct: 72 EEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLRG 131
Query: 485 DPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAAL 652
+E + + + +EG A A+KINA YLECSAK GV E F A R AL
Sbjct: 132 ----ADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVAL 183
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 97.5 bits (232), Expect = 2e-21
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 1/171 (0%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 310
KL+++GD GK+CLL+ FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDP 490
+ + Y IL+ + V S +N+ ++ +H NV IL+GNK D +
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCED-- 128
Query: 491 ATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATR 643
Q V ++G+A+A+++ +LE SAK+ V E F T R
Sbjct: 129 ----------QRQVSFEQGQALADELGV-KFLEASAKTNVNVDEAFFTLAR 168
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 90.2 bits (214), Expect = 3e-19
Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 310
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + E++GK V+L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQER 69
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND 487
+ + Y I++ + V DS N+ ++W E+ + V +LVGNK D+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNV-KQWLQEIDRYAVEGVNRLLVGNKSDM--- 125
Query: 488 PATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATR 643
+ ++ V+ + A+ +N +LE SAK V + F T +R
Sbjct: 126 ---------VDKKVVEYSVAKEFADSLN-IPFLETSAKDSTNVEQAFLTMSR 167
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 85.0 bits (201), Expect = 1e-17
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
Frame = +2
Query: 116 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVD-GKQVELALW 289
+ I +KLV++GD A GK+ L++ F KDQF + T+ ++ + +D V+L +W
Sbjct: 10 VVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIW 69
Query: 290 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILVGN 466
DTAGQE Y L P+ Y + + ++ + + SLE + W E++ P + I L GN
Sbjct: 70 DTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEK-AKSWIKELQRQAPEGIVIALAGN 128
Query: 467 KKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRA 646
K DL + + V+ + A A + N + E SAK+ E V E+F TA
Sbjct: 129 KLDLAQE-----------RRAVEKADAEAYAAEAN-LLFFETSAKTAENVNELF-TAIAK 175
Query: 647 ALQVXKK 667
L + K
Sbjct: 176 KLPLEDK 182
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 84.6 bits (200), Expect = 2e-17
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 5/179 (2%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 310
K+VI+GD GKTCL+ F +F Y T+ +++ D+ VD K V L LWDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN----VPIILVGNKKDL 478
+ L Y D ++ ++V++ S +++ E W E + P I+VGN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSV-ENWRQEFLYQTSQDECAFPFIIVGNQIDK 128
Query: 479 RNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ 655
++ R + + K + G M + E SAK V ++FET +R AL+
Sbjct: 129 DASKRAVSLHRAL--DYCKSKHGSNM-------IHFEASAKENTNVTDLFETVSRLALE 178
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 78.6 bits (185), Expect = 1e-15
Identities = 57/172 (33%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
Frame = +2
Query: 122 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDT 295
++RK KLV +G+ + GKT L+ F DQF Y T+ ++++ + ++ + V L LWDT
Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDT 67
Query: 296 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKK 472
AGQE + L P D+ V ++ + + + +S N EKW +V+ +V I+LVGNK
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVN-TEKWIEDVRAERGDDVIIVLVGNKT 126
Query: 473 DLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVF 628
DL + R++ QE EG A+++ ++E SAK+ V+ +F
Sbjct: 127 DLA-------DKRQVTQE-----EGEKKAKELK-IMHMETSAKAGHNVKLLF 165
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 77.8 bits (183), Expect = 2e-15
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 313
KLV+VGDG GK+ L I + F + Y PT+ ++Y E+DG+ L + DTAGQE+Y
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEY 69
Query: 314 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRNDP 490
+R + L+ +++ S S + I + ++ P++LV NK DL
Sbjct: 70 SAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLE--- 126
Query: 491 ATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVXKKK 670
+ V EG +A+ ++ Y+E SAK + V E F + R + K +
Sbjct: 127 ---------AERVVSRAEGEQLAKSMHCL-YVETSAKLRLNVEEAFYSLVRTIRRYNKSE 176
Query: 671 K 673
+
Sbjct: 177 E 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 77.0 bits (181), Expect = 3e-15
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 310
K++I+G+ GKT ++ + +F + Y T+ +++ ++ VD K V L LWDTAGQE
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQER 69
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPE-VKHFCPN----VPIILVGNKKD 475
+ L Y D ++ + V++ S E + + W E + P+ P IL+GNK D
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETL-DSWRDEFLIQASPSNPETFPFILLGNKVD 128
Query: 476 LRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQ 655
+ E ++M V + A + Y E SAK V+E FET + AL+
Sbjct: 129 -------VEEQKRM----VSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALE 177
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 76.6 bits (180), Expect = 4e-15
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 2/181 (1%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 310
K V++GD GK+ LL+ F++++F T+ + +I +D K+++ +WDTAGQE
Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQER 71
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 487
Y + Y L+ + + S +N+ +W E++ H N+ I+LVGNK DL
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNV-GRWLKELREHADSNIVIMLVGNKTDL--- 127
Query: 488 PATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFETATRAALQVXKK 667
+ V +E +A A + N +++E SA V E F+T ++
Sbjct: 128 ---------LHLRAVSTEEAQAFAAE-NNLSFIETSAMDASNVEEAFQTVLTEIFRIVSN 177
Query: 668 K 670
+
Sbjct: 178 R 178
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 70.1 bits (164), Expect = 4e-13
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 310
KLV+VGDG GKT + +F + Y+ T+ E + + ++ +WDTAGQE
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEK 70
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 481
LR Y ++ F V S + +N+P W V+ C N+PI+L GNK D++
Sbjct: 71 LGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVR-VCENIPIVLCGNKVDVK 126
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 70.1 bits (164), Expect = 4e-13
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 2/174 (1%)
Frame = +2
Query: 116 MAAIR-KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 292
MA I+ +++ ++G + GK+ L + + ++ F E Y PT+ + +I+ G++ + D
Sbjct: 1 MAPIKSRRIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIID 60
Query: 293 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNK 469
TAGQ++Y L ++ +S+ S S E + + H VPI++VGNK
Sbjct: 61 TAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNK 120
Query: 470 KDLRNDPATINELRKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVREVFE 631
DL Q V +EG+A+A + A+ E SA+ E V FE
Sbjct: 121 SDLH------------MQRAVTAEEGKALANEWKC-AWTEASARHNENVARAFE 161
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 64.5 bits (150), Expect = 2e-11
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDG-----KQVELALWDTA 298
K+V+ G GK+CLL F K+Q+ + TV ++ + I G K+++L +WDTA
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTA 70
Query: 299 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 475
GQE + + Y ++ + V + DS E + W +++ P+ + ++L G+K D
Sbjct: 71 GQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL-SSWLSDIRAMAPSTICVVLAGSKSD 129
Query: 476 LRN 484
L+N
Sbjct: 130 LQN 132
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 60.5 bits (140), Expect = 3e-10
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 310
K+ ++GD + GKT L++ + + F E T+ N++ I + ++ ++WD GQ +
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 475
+ + P+ D IL F + +L +I E W + + F IL+G K D
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKE-WYRQARGFNKTAVPILIGTKYD 125
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 37.1 bits (82), Expect = 0.003
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Frame = +2
Query: 134 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ-VELALWDTAGQED 310
++VI GD GK+ L+ ++ +P VF D V L L DT Q D
Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDT--QSD 61
Query: 311 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK-KDLRN 484
+ L+ ++C S E + W P + NVPI+L NK +DL N
Sbjct: 62 SNEREYLAAEIKKANVICLVYSDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDN 120
Score = 33.5 bits (73), Expect = 0.041
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Frame = +2
Query: 143 IVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRL 322
+VG +CGKT LL F + + TV V +E Q L L G+ D D L
Sbjct: 426 VVGSKSCGKTALLSSFINNNTNRLTPNTV----VNSVEFQSTQRYLVL-SEIGETDLDIL 480
Query: 323 -RPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKKDLRNDPA 493
P S D++ + + +P+S I P+++ +P + K DL
Sbjct: 481 AEPKSLEACDILCLLYDSSNPNSFSFIANLLNLYPDLQ----KIPCVFAATKADLD---- 532
Query: 494 TINELRKMKQEPVKPQE 544
R+ ++ PV+P E
Sbjct: 533 -----RQQQRYPVQPDE 544
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 95 LPLVQ*PMAAIRKK--LVIVGDGACGKTCLL 181
LP+++ + I KK ++VGD A GKTC+L
Sbjct: 1856 LPVLESVITCINKKWPCILVGDTATGKTCIL 1886
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 297 AVSHRASSTCFPSTSMSAT*FSNTVGTYTSGN*SLLNTISR 175
A S+ ++S +PSTSMSA+ S + TS + S ++ SR
Sbjct: 500 ATSYSSASASYPSTSMSASLSSVHTSSATSSSKSSSSSSSR 540
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -3
Query: 295 GIPQSQFHLFSIHFDVGNVILKHCRHVYFRELILAEH 185
G QS+ +IH + +++H ++ YF++L+ +H
Sbjct: 325 GSLQSEHTSLNIHTGLAETLVQHTKNNYFQKLLQLQH 361
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 221 PTVFENYVADIEVDGKQVELALWDTAGQ-EDYDRLRPLSYPDTDVILMCFSV 373
P +FE+ I+ G V+L LW AG+ E DR+ P + LM F +
Sbjct: 1162 PFIFEDVERAIDPSGTNVDL-LWRAAGKFELLDRILPKLFLTGHKTLMFFQM 1212
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = -1
Query: 282 ASSTCFPSTSMSAT*FSNTVGTYTSGN*SLLNTISRHVLPHAPSPTITNFLRIAAIGH*T 103
+SS+ S ++++ FS+ + +S S+ +T S AP+ T +++L +++ +
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSS 219
Query: 102 SGRRTPPHSTLT 67
S + STLT
Sbjct: 220 SSPSSSSSSTLT 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,360,363
Number of Sequences: 5004
Number of extensions: 68361
Number of successful extensions: 268
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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