Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_M09
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 82 9e-17
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 29 1.2
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 28 2.0
SPCC1223.02 |nmt1|thi3|no message in thiamine Nmt1|Schizosacchar... 28 2.0
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 27 2.7
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 27 3.5
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 4.7
SPBC11B10.02c |his3||histidinol-phosphate aminotransferase imida... 27 4.7
SPAC630.10 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.7
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 8.1
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 8.1
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 8.1
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 8.1
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 8.1
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 8.1
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 8.1
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 8.1
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 8.1
SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase Gmh1|Schizosa... 26 8.1
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 8.1
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 8.1
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 82.2 bits (194), Expect = 9e-17
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Frame = +2
Query: 206 IQYVPFSSFVHPSFWHTLTEMKLEVDKLKETTKQIFGRF-TY-RCDIGSVFEVDGTSFNK 379
+Q+ F S + +FWH L+ K+E KL + I G+F TY R +I VF ++ N
Sbjct: 7 LQFQSFHSSIDATFWHQLSNYKVEKQKLDASPLTIHGKFNTYSRGNISIVFGEAPSNSNI 66
Query: 380 TPHLEQQYHHVMGTIMNKNTIEDFKSIDKASLLNSIGEMIWSNLRXRTWITNPSALLNFF 559
L + GT++N NT ++F + D + IGE++ ++++ P+ LL F
Sbjct: 67 KDCLAE------GTLLNANTPQEFTNADVKKIREEIGEVLLNSIKNGVVSERPNELLRFL 120
Query: 560 ILSFADLKKFHYYYWFAFPA 619
I S+AD+K + Y+YW FP+
Sbjct: 121 IFSYADIKAYKYHYWCLFPS 140
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 351 NTEPISQRYVNLPNICLVVSFNLSTSNFISVRVCQNDG*T 232
+T P QRY++L +C V++ L +N ++ + G T
Sbjct: 298 STSPKHQRYISLQEVCSVIAQQLQITNLEALNKLSSHGET 337
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = -3
Query: 284 CLLLISFQ*GYARMMDERKTKTAHTVLFLFGFVLPTYFQHNKIEFLIYFFTQCSYNVLYR 105
CLLL++F+ + R + + F + F N I L+ +F QCSY+V Y
Sbjct: 135 CLLLLAFKLFFIRNDPTPFNARSANLKNYIAFPI-CLFVINHILILLGYF-QCSYSVFYA 192
Query: 104 FTFFLKL 84
F++ L
Sbjct: 193 SVFYILL 199
>SPCC1223.02 |nmt1|thi3|no message in thiamine
Nmt1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 346
Score = 27.9 bits (59), Expect = 2.0
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -3
Query: 437 CFCSLLYPSHDDIVA 393
CFC++LY +HD+ +A
Sbjct: 196 CFCTILYIAHDEFIA 210
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 338 IGSVFEVDGTSFNKTPHLEQQYHHVMGTIMNKNTI 442
I S+F + F LE+QYHHV+ ++ N I
Sbjct: 660 ISSIFWIAHHVFANDALLEKQYHHVLYSLANTYVI 694
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 27.1 bits (57), Expect = 3.5
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 368 SFNKTPHLEQQYHHVMGTIMNKNTIEDFKSIDKASLLN-SIGEMIWSNLRXRTWITNPSA 544
SF +LEQQ+H + + N I D S + SL S E I S R+ I A
Sbjct: 14 SFRNNENLEQQFHPLREELDNAGPINDRTS--ELSLEGVSKAEAIASTWSKRSIIV---A 68
Query: 545 LLNFFILSFA 574
L ++LSFA
Sbjct: 69 YLGLYLLSFA 78
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 848 KYXLTRSRSMQLALLTSXTSDNFFTXRSSFFLITT 744
KY ++R + A TSDNF+ + F L+ T
Sbjct: 1239 KYLISRISDLVRAAFVLSTSDNFYLKQGGFELLDT 1273
>SPBC11B10.02c |his3||histidinol-phosphate aminotransferase
imidazole acetol phosphate transaminase
His3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 332 CDIGSVFEVDGTSFNKTPHLEQ 397
C GSV VDG FN+ P Q
Sbjct: 36 CAYGSVISVDGVEFNRYPDPRQ 57
>SPAC630.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 251 ARMMDERKTKTAHTVLFLFGFVLPTYFQHNKIEFLIYFF 135
+R MDE KT H+++ FGF+ KI + +Y +
Sbjct: 205 SRYMDE---KTLHSIMIQFGFICRQKSISKKIAYYLYSY 240
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase
Gmh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 129 MLLQRFISFYFLFEINFMPIAKMNVLSFKILRIPYSVSV 13
ML + +F F + F+P +++V FK+ + Y +V
Sbjct: 17 MLALAIVFTFFAFGLYFIPHDEISVFDFKLPALQYETTV 55
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.1
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 291 RKLPNKYSAD-LHTAVILALYLKWMVPHSIRHL 386
RKL +K + D HT L++ WM+P+S+R L
Sbjct: 144 RKLMSKANVDDFHTR----LFILWMLPYSLRKL 172
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,535,530
Number of Sequences: 5004
Number of extensions: 76113
Number of successful extensions: 247
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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