Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M09
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000091-1|AAH00091.1|  676|Homo sapiens ATG7 protein protein.        114   5e-25
AF094516-1|AAC69630.1|  703|Homo sapiens E1-like protein protein.     114   5e-25
BC107163-1|AAI07164.1|  551|Homo sapiens hypothetical protein FL...    31   7.3  
BC107162-1|AAI07163.1|  551|Homo sapiens hypothetical protein FL...    31   7.3  

>BC000091-1|AAH00091.1|  676|Homo sapiens ATG7 protein protein.
          Length = 676

 Score =  114 bits (274), Expect = 5e-25
 Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
 Frame = +2

Query: 206 IQYVPFSSFVHPSFWHTLTEMKLEVDKLKETTKQIFGRFTYRCDIGSV---FEVDGTSFN 376
           +Q+ PFSS +   FWH LT+ KL   +L E  K I G + Y  D   +     ++ ++F+
Sbjct: 13  LQFAPFSSALDVGFWHELTQKKLNEYRLDEAPKDIKGYY-YNGDSAGLPARLTLEFSAFD 71

Query: 377 KTPHLEQQYHHVMGTIMNKNTIEDFKSIDKASLLNSIGEMIWSNLRXRTWITNPSALLNF 556
            +     +    +GT+ N NT+E FK+ DK  LL      IW +++  T + NP  L  F
Sbjct: 72  MSAPTPARCCPAIGTLYNTNTLESFKTADKKLLLEQAANEIWESIKSGTALENPVLLNKF 131

Query: 557 FILSFADLKKFHYYYWFAFPAPSQP-TVHMKGRSTKISDYFNNKQLETLSQCYKSL 721
            +L+FADLKK+H+YYWF +PA   P ++ +      +   F+ KQ+E L   Y +L
Sbjct: 132 LLLTFADLKKYHFYYWFCYPALCLPESLPLIQGPVGLDQRFSLKQIEALECAYDNL 187


>AF094516-1|AAC69630.1|  703|Homo sapiens E1-like protein protein.
          Length = 703

 Score =  114 bits (274), Expect = 5e-25
 Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
 Frame = +2

Query: 206 IQYVPFSSFVHPSFWHTLTEMKLEVDKLKETTKQIFGRFTYRCDIGSV---FEVDGTSFN 376
           +Q+ PFSS +   FWH LT+ KL   +L E  K I G + Y  D   +     ++ ++F+
Sbjct: 13  LQFAPFSSALDVGFWHELTQKKLNEYRLDEAPKDIKGYY-YNGDSAGLPARLTLEFSAFD 71

Query: 377 KTPHLEQQYHHVMGTIMNKNTIEDFKSIDKASLLNSIGEMIWSNLRXRTWITNPSALLNF 556
            +     +    +GT+ N NT+E FK+ DK  LL      IW +++  T + NP  L  F
Sbjct: 72  MSAPTPARCCPAIGTLYNTNTLESFKTADKKLLLEQAANEIWESIKSGTALENPVLLNKF 131

Query: 557 FILSFADLKKFHYYYWFAFPAPSQP-TVHMKGRSTKISDYFNNKQLETLSQCYKSL 721
            +L+FADLKK+H+YYWF +PA   P ++ +      +   F+ KQ+E L   Y +L
Sbjct: 132 LLLTFADLKKYHFYYWFCYPALCLPESLPLIQGPVGLDQRFSLKQIEALECAYDNL 187


>BC107163-1|AAI07164.1|  551|Homo sapiens hypothetical protein
           FLJ13305 protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +2

Query: 623 SQPTVHMKGRSTKISDYFNNKQLETLSQCYKSLEENKR 736
           S   V  KG+S K+ +YFNN++ +++++  +S  E ++
Sbjct: 473 SDEFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEK 510


>BC107162-1|AAI07163.1|  551|Homo sapiens hypothetical protein
           FLJ13305 protein.
          Length = 551

 Score = 30.7 bits (66), Expect = 7.3
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +2

Query: 623 SQPTVHMKGRSTKISDYFNNKQLETLSQCYKSLEENKR 736
           S   V  KG+S K+ +YFNN++ +++++  +S  E ++
Sbjct: 473 SDEFVSKKGQSGKVLEYFNNQETKSVTEDKESFNEEEK 510


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,346,010
Number of Sequences: 237096
Number of extensions: 2325069
Number of successful extensions: 11571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11569
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)