Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M03
         (888 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   2.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   4.9  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           23   4.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   4.9  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   6.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 130 DFCDARQGGGALWKNAKQRR 71
           D C    GG  LW+N + +R
Sbjct: 343 DACQMDSGGPVLWQNPRTKR 362


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 119 CSSGGRSTMEKRQATQAFLQVPGQNLKE 36
           C +   +++EK +   AF+  P +N+KE
Sbjct: 241 CWTQTENSLEKAKQVGAFMGCPTRNVKE 268



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 674 ISRRSFDLFYGGLTLSGT 727
           +S  S  LF GG+++SGT
Sbjct: 220 LSPLSAGLFQGGISISGT 237


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 119 CSSGGRSTMEKRQATQAFLQVPGQNLKE 36
           C +   +++EK +   AF+  P +N+KE
Sbjct: 112 CWTQTENSLEKAKQVGAFMGCPTRNVKE 139



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 674 ISRRSFDLFYGGLTLSGT 727
           +S  S  LF GG+++SGT
Sbjct: 91  LSPLSAGLFQGGISISGT 108


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +3

Query: 669  KGSQEDPLIFST 704
            +G Q+DP+IFST
Sbjct: 1126 EGEQKDPVIFST 1137


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 119 CSSGGRSTMEKRQATQAFLQVPGQNLKE 36
           C +   +++EK +   AF+  P +N+KE
Sbjct: 241 CWTQTENSLEKAKQVGAFMGCPTRNVKE 268



 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 674 ISRRSFDLFYGGLTLSGT 727
           +S  S  LF GG+++SGT
Sbjct: 220 LSPLSAGLFQGGISISGT 237


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 280 KRHASRREKGGQVSGKRQGRNRRAH 206
           KR  +++ +G + +     +NRRAH
Sbjct: 39  KRPKTKKSQGSRTTHNELEKNRRAH 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,662
Number of Sequences: 438
Number of extensions: 6027
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)