Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M02
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.3  
12_02_0299 - 17051570-17052474,17053542-17053755                       30   2.2  
02_02_0359 - 9390175-9390416,9390924-9391044,9391069-9391410,939...    29   5.1  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   6.8  
11_06_0188 + 21036465-21036627,21036735-21036883,21037369-210374...    29   6.8  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   6.8  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   6.8  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = +2

Query: 467 PPPPXXXXXXPXTXXXPPQXXXXXGXGXPPLXPXGGGGGXXXXXXP 604
           PPPP      P     PP      G   PP  P GG  G      P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 582 PPPPPXGXRGGXPXP 538
           PPPPP G +GG P P
Sbjct: 366 PPPPPGGKKGGPPPP 380


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +1

Query: 163 FPPXKKXPFFXXXKXFFSXPXPKPXKXPXPPP 258
           FP     P F     F+  P P P   P PPP
Sbjct: 301 FPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332


>02_02_0359 -
           9390175-9390416,9390924-9391044,9391069-9391410,
           9392400-9392759
          Length = 354

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = -1

Query: 582 PPPPPXGXRGGXPXPXXXXXXGGXXFVXGXXXXXXGGGG 466
           PPPPP         P       G  FV G      GGGG
Sbjct: 39  PPPPPPPPPSQPSAPPAREGRNGYVFVKGLKGGGGGGGG 77


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 582 PPPPPXGXRGGXPXP 538
           PPPPP G  GG P P
Sbjct: 625 PPPPPPGKPGGPPPP 639


>11_06_0188 +
           21036465-21036627,21036735-21036883,21037369-21037484,
           21037939-21038101
          Length = 196

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 266 PPXGGGXGXFXGXGXGWEKXXXXXXKXGXFFXGGK 162
           PP GGG G F G G G  +      + G F  GG+
Sbjct: 3   PPRGGGGGRFGGGGGG--RFGGGGGRGGRFGGGGR 35


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 582 PPPPPXGXRGGXPXP 538
           PPPPP G  GG P P
Sbjct: 930 PPPPPPGKPGGPPPP 944


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 582  PPPPPXGXRGGXPXP 538
            PPPPP G  GG P P
Sbjct: 1149 PPPPPVGGLGGPPAP 1163



 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 579  PPPPXGXRGGXPXP 538
            PPPP G RGG P P
Sbjct: 1163 PPPPAGFRGGTPPP 1176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,899,816
Number of Sequences: 37544
Number of extensions: 291381
Number of successful extensions: 1504
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)