Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_M02
         (912 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p pro...    31   2.9  
AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p pro...    31   2.9  
AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA...    31   2.9  

>AY089614-1|AAL90352.1|  417|Drosophila melanogaster RE28792p
           protein.
          Length = 417

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +2

Query: 467 PPPPXXXXXXPXTXXXPPQXXXXXGXGXPPLXPXGGG 577
           PPP       P     PP      G   PP+ P GGG
Sbjct: 344 PPPATEPLNPPIPGTLPPLIPPPPGTSAPPMPPWGGG 380


>AY060989-1|AAL28537.1|  222|Drosophila melanogaster GM14833p
           protein.
          Length = 222

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +2

Query: 467 PPPPXXXXXXPXTXXXPPQXXXXXGXGXPPLXPXGGG 577
           PPP       P     PP      G   PP+ P GGG
Sbjct: 149 PPPATEPLNPPIPGTLPPLIPPPPGTSAPPMPPWGGG 185


>AE014297-2366|AAF55430.3|  787|Drosophila melanogaster CG5836-PA
           protein.
          Length = 787

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +2

Query: 467 PPPPXXXXXXPXTXXXPPQXXXXXGXGXPPLXPXGGG 577
           PPP       P     PP      G   PP+ P GGG
Sbjct: 714 PPPATEPLNPPIPGTLPPLIPPPPGTSAPPMPPWGGG 750


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,221,412
Number of Sequences: 53049
Number of extensions: 396626
Number of successful extensions: 1795
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)