Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L23
(872 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical ... 29 3.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.3
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr... 28 7.6
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 28 7.6
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l... 28 7.6
>Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical
protein C47A10.7 protein.
Length = 221
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = -3
Query: 687 PYVANDCNGFPCGWIHCLSVD*IDHTNKVHV*G*IVLIITKCYYFHCSLALFYNTSFNRE 508
P+++ GFP G +HC+ VD H V ++ + C + + LF + +F R
Sbjct: 69 PFLSAPFVGFPMGVLHCIGVDTAVHVFIASVIAYLMPVSIICLFENRFYILFASKTFWRY 128
Query: 507 IIFIIVHCDFV 475
I+ D++
Sbjct: 129 ARHPIIIIDYI 139
>AL021483-7|CAA16344.3| 218|Caenorhabditis elegans Hypothetical
protein Y38H8A.5 protein.
Length = 218
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 612 CGRFNLQINNVSIHKENHYNHWQHMAHLMVNGYCLSF-LFQHLKEI 746
C R Q N++ H H H H+ G+C +F L +HL+++
Sbjct: 169 CSRAFHQSYNLAFHMFTHEEHKPFTCHVCSKGFCRNFDLKKHLRKM 214
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 163 SFFGKRRSSPVEDETPPIPGPKSDDGFVVVDPTSP 267
SF R SSP PP P P SDD V P P
Sbjct: 1327 SFSTSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPP 1361
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 158 FHRFSEKGDHHQLKTRHRRYLARS---PTMDLSSLILRLQEVVFTPVLGLDQVRILKD 322
FHR +E G L T R A+ P+ LSS + L + V +D++++L+D
Sbjct: 228 FHRTNELGIPCDLVTGEERRFAKDNHHPSQHLSSTVEMLSTQMRVEVAVIDEIQMLRD 285
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 158 FHRFSEKGDHHQLKTRHRRYLARS---PTMDLSSLILRLQEVVFTPVLGLDQVRILKD 322
FHR +E G L T R A+ P+ LSS + L + V +D++++L+D
Sbjct: 230 FHRTNELGIPCDLVTGEERRFAKDNHHPSQHLSSTVEMLSTQMRVEVAVIDEIQMLRD 287
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 209 GVSSSTGDDLLFPKNDENILVK*IIYFTS*DLLSRLNYDSI 87
GV+SSTG D L+ ND+ Y T+ D +RL Y+ I
Sbjct: 833 GVNSSTGSDFLYNTNDK--------YLTNSDTTNRLVYNGI 865
>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
protein B0457.1a protein.
Length = 1014
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 209 GVSSSTGDDLLFPKNDENILVK*IIYFTS*DLLSRLNYDSI 87
GV+SSTG D L+ ND+ Y T+ D +RL Y+ I
Sbjct: 835 GVNSSTGSDFLYNTNDK--------YLTNSDTTNRLVYNGI 867
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 209 GVSSSTGDDLLFPKNDENILVK*IIYFTS*DLLSRLNYDSI 87
GV+SSTG D L+ ND+ Y T+ D +RL Y+ I
Sbjct: 833 GVNSSTGSDFLYNTNDK--------YLTNSDTTNRLVYNGI 865
>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
protein LAT-1A protein.
Length = 1014
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -1
Query: 209 GVSSSTGDDLLFPKNDENILVK*IIYFTS*DLLSRLNYDSI 87
GV+SSTG D L+ ND+ Y T+ D +RL Y+ I
Sbjct: 835 GVNSSTGSDFLYNTNDK--------YLTNSDTTNRLVYNGI 867
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,811,121
Number of Sequences: 27780
Number of extensions: 380648
Number of successful extensions: 1040
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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