Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L22
(1048 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4GUC7 Cluster: Mitochondrial 28S ribosomal protein S18... 172 1e-41
UniRef50_UPI00015B5CDD Cluster: PREDICTED: similar to mitochondr... 75 4e-12
UniRef50_Q9VA81 Cluster: CG9688-PA; n=2; Sophophora|Rep: CG9688-... 69 3e-10
UniRef50_Q7Q866 Cluster: ENSANGP00000012972; n=3; Endopterygota|... 67 6e-10
UniRef50_UPI0000E803CF Cluster: PREDICTED: similar to CGI-134 pr... 62 2e-08
UniRef50_Q86QR9 Cluster: Mitochondrial ribosomal protein S18C; n... 60 1e-07
UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondri... 59 2e-07
UniRef50_UPI0000E2034A Cluster: PREDICTED: mitochondrial ribosom... 59 2e-07
UniRef50_A4FVK9 Cluster: Si:ch211-85e10.6 protein; n=3; Clupeoce... 59 2e-07
UniRef50_Q4SYF4 Cluster: Chromosome undetermined SCAF12073, whol... 55 3e-06
UniRef50_UPI0000D9F462 Cluster: PREDICTED: similar to 28S riboso... 54 8e-06
UniRef50_Q22483 Cluster: Putative uncharacterized protein; n=2; ... 48 5e-04
UniRef50_UPI0000588E60 Cluster: PREDICTED: hypothetical protein;... 46 0.002
UniRef50_Q9WZ74 Cluster: 30S ribosomal protein S18; n=5; Bacteri... 36 1.7
UniRef50_A0DGQ2 Cluster: Chromosome undetermined scaffold_5, who... 36 2.3
>UniRef50_A4GUC7 Cluster: Mitochondrial 28S ribosomal protein S18c;
n=1; Bombyx mori|Rep: Mitochondrial 28S ribosomal
protein S18c - Bombyx mori (Silk moth)
Length = 137
Score = 172 bits (419), Expect = 1e-41
Identities = 88/124 (70%), Positives = 91/124 (73%)
Frame = +3
Query: 108 MKMALFKSFFARQMLSTHQAVLSTFRTQSTNLKPDPDAPVEMENPFKKELKQCILCKLNI 287
MKMALFKSFFARQMLSTHQAVLST RTQS+NLKPDPDAPVEMENPFKKELKQCILCKLNI
Sbjct: 1 MKMALFKSFFARQMLSTHQAVLSTIRTQSSNLKPDPDAPVEMENPFKKELKQCILCKLNI 60
Query: 288 DPDYKNXRLLSQFQSPYTVQNLPEAYNWSM*XKTDATGAGXNQGLRI*PIWPXTYKHKIF 467
DPDYKN RLLSQFQSPYT + P K + P TYKHKIF
Sbjct: 61 DPDYKNYRLLSQFQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDF-AYMPYTYKHKIF 119
Query: 468 LXDP 479
L DP
Sbjct: 120 LKDP 123
>UniRef50_UPI00015B5CDD Cluster: PREDICTED: similar to mitochondrial
ribosomal protein, S18C, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
ribosomal protein, S18C, putative - Nasonia vitripennis
Length = 145
Score = 74.5 bits (175), Expect = 4e-12
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +3
Query: 90 LSINTYMKMALFKSFFARQMLSTHQAV---LSTFRTQSTNLKPDPDAPVEMENPFKKELK 260
+ I TY ++ ++F + LS V S R Q ++ + + DAP+E+ENP+++E K
Sbjct: 1 MKILTYSRVLSDQAFSLLRNLSNSGRVSVYASQQRAQHSSAE-EADAPIELENPYQRERK 59
Query: 261 QCILCKLNIDPDYKNXRLLSQFQSPYT 341
CILCK NIDPDYKN R LSQFQS +T
Sbjct: 60 ICILCKHNIDPDYKNVRFLSQFQSRFT 86
Score = 37.9 bits (84), Expect = 0.43
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +1
Query: 292 PITRXTDYYRNFNLRTRCRIYPRHITGLCXRKQMQLEXXITK 417
P + + F R RIY RHITGLC KQ ++E ITK
Sbjct: 70 PDYKNVRFLSQFQSRFTGRIYGRHITGLCKYKQERVENEITK 111
>UniRef50_Q9VA81 Cluster: CG9688-PA; n=2; Sophophora|Rep: CG9688-PA
- Drosophila melanogaster (Fruit fly)
Length = 140
Score = 68.5 bits (160), Expect = 3e-10
Identities = 27/44 (61%), Positives = 38/44 (86%)
Frame = +3
Query: 210 DPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
D D P++++NP++K+ +QCILCK +I+P YKN +LLSQFQSPYT
Sbjct: 38 DLDLPIDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYT 81
Score = 35.5 bits (78), Expect = 2.3
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 346 RIYPRHITGLCXRKQMQLEXXITK 417
RIY RHITGLC R+Q Q+E I +
Sbjct: 83 RIYGRHITGLCKRRQEQVEQAILR 106
>UniRef50_Q7Q866 Cluster: ENSANGP00000012972; n=3;
Endopterygota|Rep: ENSANGP00000012972 - Anopheles
gambiae str. PEST
Length = 149
Score = 67.3 bits (157), Expect = 6e-10
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 1/43 (2%)
Frame = +3
Query: 216 DAPVEM-ENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
D+PV + +NPF KE QC+LCK IDPDYKN +LLSQFQSPYT
Sbjct: 48 DSPVVLKDNPFAKERVQCVLCKHGIDPDYKNVQLLSQFQSPYT 90
>UniRef50_UPI0000E803CF Cluster: PREDICTED: similar to CGI-134
protein; n=1; Gallus gallus|Rep: PREDICTED: similar to
CGI-134 protein - Gallus gallus
Length = 101
Score = 62.5 bits (145), Expect = 2e-08
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 183 RTQSTNLKPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
R Q + D P+EMENP+++ K+CILC +N+ DYKN +LLSQF SPYT
Sbjct: 26 RLQHQQAAAESDLPIEMENPYEEPPKRCILCGINV--DYKNVQLLSQFVSPYT 76
>UniRef50_Q86QR9 Cluster: Mitochondrial ribosomal protein S18C; n=1;
Branchiostoma belcheri tsingtauense|Rep: Mitochondrial
ribosomal protein S18C - Branchiostoma belcheri
tsingtauense
Length = 179
Score = 59.7 bits (138), Expect = 1e-07
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +3
Query: 192 STNLKPDPDAPV-EMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
STN D D P +ME+P+K+E+K+CILC N++ YKN +LLSQF SPYT
Sbjct: 48 STNETEDTDMPQRQMEDPYKEEVKRCILC--NVELSYKNPQLLSQFLSPYT 96
>UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondrial
precursor; n=11; Theria|Rep: 28S ribosomal protein S18c,
mitochondrial precursor - Homo sapiens (Human)
Length = 142
Score = 59.3 bits (137), Expect = 2e-07
Identities = 35/96 (36%), Positives = 51/96 (53%)
Frame = +3
Query: 192 STNLKPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYTVQNLPEAYNW 371
S + + D P+ MENP+K+ LK+CILC ++ DYKN +LLSQF SP+T + +
Sbjct: 41 SQQVSSNEDLPISMENPYKEPLKKCILCGKHV--DYKNVQLLSQFVSPFT-GCIYGRHIT 97
Query: 372 SM*XKTDATGAGXNQGLRI*PIWPXTYKHKIFLXDP 479
+ K + +I P TYK +L DP
Sbjct: 98 GLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDP 133
>UniRef50_UPI0000E2034A Cluster: PREDICTED: mitochondrial ribosomal
protein S18C isoform 1; n=1; Pan troglodytes|Rep:
PREDICTED: mitochondrial ribosomal protein S18C isoform
1 - Pan troglodytes
Length = 125
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3
Query: 192 STNLKPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
S + + D P+ MENP+K+ LK+CILC ++ DYKN +LLSQF SP+T
Sbjct: 41 SQQVSSNEDLPISMENPYKEPLKKCILCGKHV--DYKNVQLLSQFVSPFT 88
>UniRef50_A4FVK9 Cluster: Si:ch211-85e10.6 protein; n=3;
Clupeocephala|Rep: Si:ch211-85e10.6 protein - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 136
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +3
Query: 150 LSTHQAVLSTFRTQSTNLKPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQ 329
++T Q V S +Q D D P++MENP+K+ K CILC N+ D+KN +LLSQF
Sbjct: 22 IATAQCVRSLTTSQQDPASKD-DMPIKMENPYKQPAKTCILC--NVTVDFKNVQLLSQFI 78
Query: 330 SPYT 341
SP+T
Sbjct: 79 SPHT 82
Score = 35.9 bits (79), Expect = 1.7
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 346 RIYPRHITGLCXRKQMQLEXXITKXSGFSLYGRTL 450
RIY RHITGLC RKQ ++ I K TL
Sbjct: 84 RIYGRHITGLCGRKQKEVTKAIKKSRSMGFMSVTL 118
>UniRef50_Q4SYF4 Cluster: Chromosome undetermined SCAF12073, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF12073, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 128
Score = 55.2 bits (127), Expect = 3e-06
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 150 LSTHQAV-LSTFRTQSTNLKPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQF 326
LS H + L + S K D V+MENP+K+ K C+LC N+ DYKN +LLSQF
Sbjct: 14 LSPHGSTSLRSLTVTSDVAKQKDDMLVKMENPYKEPQKGCVLC--NVTVDYKNIQLLSQF 71
Query: 327 QSPYTVQNLPEAYNWSM*XKTDATGAGXNQGLRI*PIWPXTYKHKIFLXDP 479
SP+T + + K + + T+KH F+ DP
Sbjct: 72 ISPHTGKIYGRHFTGLCGVKQKQVAKAIKKAQSM-GFMSVTHKHPQFMRDP 121
>UniRef50_UPI0000D9F462 Cluster: PREDICTED: similar to 28S ribosomal
protein S18c, mitochondrial precursor (MRP-S18-c)
(Mrps18c) (MRP-S18-1); n=1; Macaca mulatta|Rep:
PREDICTED: similar to 28S ribosomal protein S18c,
mitochondrial precursor (MRP-S18-c) (Mrps18c)
(MRP-S18-1) - Macaca mulatta
Length = 105
Score = 53.6 bits (123), Expect = 8e-06
Identities = 25/52 (48%), Positives = 35/52 (67%)
Frame = +3
Query: 186 TQSTNLKPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
+Q + + D P MENP+K+ LK+CILC ++ +YKN LLSQF SP+T
Sbjct: 38 SQYKQVSSNEDLPTPMENPYKEPLKKCILCGKHV--NYKNAWLLSQFVSPFT 87
>UniRef50_Q22483 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 139
Score = 47.6 bits (108), Expect = 5e-04
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 117 ALFKSFFARQMLSTHQAVLSTFRTQSTNLKPDPDAPVEMEN-PFKKELKQCILCKLNIDP 293
+L +SF Q T + S+ TQ + D PV +EN P+ KE ++ LC ++
Sbjct: 7 SLVRSFIRPQ---TFRLCSSSSTTQGSPSVSSDDEPVILENNPYTKEPRKSFLCSTGVEL 63
Query: 294 DYKNXRLLSQFQSPYT 341
DYKN RLL QF S ++
Sbjct: 64 DYKNSRLLQQFVSTFS 79
>UniRef50_UPI0000588E60 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 195
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 234 ENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYT 341
E+P+K +++CILCK + YKN +LLSQF SP T
Sbjct: 70 EDPYKLAVEKCILCKYQVPISYKNVQLLSQFVSPNT 105
>UniRef50_Q9WZ74 Cluster: 30S ribosomal protein S18; n=5;
Bacteria|Rep: 30S ribosomal protein S18 - Thermotoga
maritima
Length = 75
Score = 35.9 bits (79), Expect = 1.7
Identities = 15/28 (53%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
Frame = +3
Query: 246 KKELKQCILCKLNID-PDYKNXRLLSQF 326
KK++K+C LC++ +D DYK+ RLLS+F
Sbjct: 7 KKKIKKCRLCEMKLDYVDYKDTRLLSEF 34
>UniRef50_A0DGQ2 Cluster: Chromosome undetermined scaffold_5, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_5,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 475
Score = 35.5 bits (78), Expect = 2.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 71 FTCCIFLVNKYLHENGIV*IIFCPANVKHSSGSTLHIQD 187
F CC+ L +YLH NGI+ P N+ LH+ D
Sbjct: 261 FACCMLLALQYLHSNGIIHRDLKPENLVFDKDGFLHLTD 299
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,506,333
Number of Sequences: 1657284
Number of extensions: 9480294
Number of successful extensions: 21200
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21183
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 100838077769
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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