Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L22
         (1048 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785...    29   8.1  

>02_05_0544 +
           29876337-29876524,29876850-29876882,29878390-29878577,
           29879755-29879811,29879909-29880061,29880812-29881278,
           29881477-29881635,29881718-29881834,29881966-29882117,
           29883436-29883530,29883619-29884525,29884604-29884688,
           29884775-29884843,29885045-29885224,29885367-29885495
          Length = 992

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = +3

Query: 204 KPDPDAPVEMENPFKKELKQCILCKLNIDPDYKNXRLLSQFQSPYTVQNLPEAYN 368
           K D    +  ENP  K+L Q  L   N+DP   N  +   F +   V+ + E  N
Sbjct: 406 KLDIHFSIPKENPSDKDLNQGTLVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPN 460


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,030,618
Number of Sequences: 37544
Number of extensions: 256777
Number of successful extensions: 467
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3094456940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)