Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L21
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 91 3e-17
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 79 1e-13
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 75 3e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 46 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 42 0.028
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.049
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 39 0.20
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 35 2.4
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 34 5.6
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.6
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1; Hal... 33 9.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 91.5 bits (217), Expect = 3e-17
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +3
Query: 531 FSIGSAPLTSITKIDAXVXGGETRQDYKDTRRXPWKPPSCALLFRPCR 674
FSIGSAPLTSITKIDA V GGETRQDYKDTRR P + PSCALLFRPCR
Sbjct: 16 FSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCR 63
Score = 47.2 bits (107), Expect = 6e-04
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1
Query: 667 PAAXXDTCPPFSLREAWRFLIXHA 738
P DTCPPFSLREAWRFLI HA
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHA 84
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/46 (80%), Positives = 38/46 (82%)
Frame = +3
Query: 531 FSIGSAPLTSITKIDAXVXGGETRQDYKDTRRXPWKPPSCALLFRP 668
FSIGSAPLTSITK DA + GGETRQDYKDTRR P PSCALLF P
Sbjct: 52 FSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = +3
Query: 531 FSIGSAPLTSITKIDAXVXGGETRQDYKDTRRXPWKPPSCALLFRP 668
FSIGSAPLTSI K DA + GGETRQDYKD RR P PSCALLF P
Sbjct: 84 FSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +1
Query: 322 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 420
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 5e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 498 PXAGXLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 385
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 298 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 465
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 45.6 bits (103), Expect = 0.002
Identities = 34/90 (37%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = -1
Query: 858 GWXQDXXTRIRXXGXXERGVWAPXPRXGXXXXXPEXEXPXXVXYEKAPRFPKGERRTGIX 679
GW QD R ERGV A P P + V YEKAPRFPKG++ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPK-PSRDTSS-VSYEKAPRFPKGKKAEQVS 66
Query: 678 XSGRVGTGERTREVSRG-NAWYLYSPVGFR 592
R G R E + G + SPVGFR
Sbjct: 67 GK-RQGRNRRAHEGAAGEKSPASLSPVGFR 95
Score = 41.5 bits (93), Expect = 0.028
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = -3
Query: 709 PEGRKADRYPVKRQGRNRRAHEGGFQGXRLVSL*SCRVSPPXT 581
P+G+KA++ KRQGRNRRAHEG SL PP T
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 101 DPDMIRYIDEFGQTTTRMQ 157
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 417 HSKAVIRLSTESGDNAGKNM 476
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 41.5 bits (93), Expect = 0.028
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 678 TGYLSAFLPSGSVALSHXSR 737
TGYLSAFLPSGSVALSH SR
Sbjct: 11 TGYLSAFLPSGSVALSHSSR 30
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 296 SALMNRPTRGERRFAYW 346
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 368 ERGSGRAPNTQTASPRALADSLMQ 297
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 38.7 bits (86), Expect = 0.20
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 531 FSIGSAPLTSITKIDAXVXGGETRQDYKDTRRXPWKPPSCALLFRP 668
F S PLT+ITKI +T+ +YK T P + PS +LLF P
Sbjct: 69 FPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 35.1 bits (77), Expect = 2.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 507 GSWPXAGXLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 385
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 610 IKIPGVXPGNLPRALSCSDPAAXXDTCPPFSL 705
+KI V +LP ALSCS+PA PPFSL
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSL 63
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 179 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 346
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 259 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 95
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_A1WXA2 Cluster: VanZ family protein precursor; n=1;
Halorhodospira halophila SL1|Rep: VanZ family protein
precursor - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 1131
Score = 33.1 bits (72), Expect = 9.8
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = -1
Query: 558 SSGGR---SLWKTPATRPFYGSWPXAGXLLTCSFL-RYPLILWITVLPPL 421
SSGG ++W P + W AG L+ L RYPL W+ VLPPL
Sbjct: 504 SSGGLLAVAIWLAAWAWPAWPGWLAAGLLIYAVLLWRYPLA-WLWVLPPL 552
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,451,890
Number of Sequences: 1657284
Number of extensions: 11791013
Number of successful extensions: 27866
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27859
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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