Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L20
         (841 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0191 + 41885121-41885909,41886152-41886190,41886701-418867...   169   3e-42
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467...    34   0.12 
06_01_1116 + 9197761-9199956                                           30   2.6  
05_06_0208 + 26385379-26385485,26385819-26385965,26385994-263860...    28   8.1  

>01_07_0191 +
           41885121-41885909,41886152-41886190,41886701-41886784,
           41887331-41887413,41887501-41887588,41887736-41887990,
           41888275-41888403
          Length = 488

 Score =  169 bits (410), Expect = 3e-42
 Identities = 83/201 (41%), Positives = 123/201 (61%)
 Frame = +2

Query: 98  LALKLFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLYDLAVKDSQFDHL 277
           L L+L +I+AVKFG F  K+GI +P Y DLR++V++P ++   +++L  L      +D L
Sbjct: 9   LILELHAIEAVKFGAFVLKSGITSPIYLDLRMLVAHPRLLSTVASLLGSLPAT-RPYDLL 67

Query: 278 CGVPYTALPIATLLSIQAKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSS 457
           CGVPYTALPIA++LS  A  PML+RR     +   + ++G F+  D  LI+ED++T+GSS
Sbjct: 68  CGVPYTALPIASVLSAAASVPMLLRRYHVTPHAAAECLDGSFRAGDAVLIVEDLVTTGSS 127

Query: 458 ILETVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKSLFTMRTXXXXXXXXXXXXX 637
           +LETV  L+  GLV  +A +++DREQGGRENLA NG+ + SL T+               
Sbjct: 128 VLETVAPLREVGLVVADAVVVIDREQGGRENLAANGVALHSLMTLTEVLAVLVKRGKLGE 187

Query: 638 XXVVTVKNYLNETKAPVIENL 700
                VK +L+  +   +  L
Sbjct: 188 EKAQEVKRFLDANRKMAVPGL 208


>01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752,
            29646843-29646899,29647007-29647094,29647304-29647374,
            29647457-29647585,29647662-29648051,29648332-29648517,
            29648612-29648692,29648787-29648879,29648966-29649086,
            29649200-29649409,29649560-29649727,29649898-29650065,
            29650144-29650311,29650453-29650620,29650738-29650905,
            29651023-29651190,29651567-29651734,29652391-29652558,
            29652645-29652812,29655720-29655887,29656069-29656236,
            29656391-29656558,29656670-29656837,29657525-29657664,
            29658033-29658221,29658243-29658315,29658379-29658452,
            29658535-29658654,29658718-29658738,29658794-29658999,
            29659094-29659271,29660066-29660126,29660232-29660341,
            29660427-29660558,29661091-29661258,29661339-29661465,
            29661794-29661831,29663321-29663422,29663505-29663562,
            29663659-29663760,29663844-29663990,29664098-29664234,
            29664313-29664462,29664561-29664720,29665820-29665878,
            29666025-29666181,29666288-29666433,29666523-29666666,
            29667242-29667376
          Length = 2344

 Score = 34.3 bits (75), Expect = 0.12
 Identities = 17/71 (23%), Positives = 37/71 (52%)
 Frame = +2

Query: 320  SIQAKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLV 499
            ++ AK+ +L+  +E  +   K   E H + D+    +ED      S+  T+K L+ +G +
Sbjct: 1497 NVGAKESLLLTEREQNASTLKLLAEAHLEIDELIRKLEDSDRKSDSLQSTIKRLEEDG-I 1555

Query: 500  TTEAAIILDRE 532
              EA ++ +++
Sbjct: 1556 AKEALLLTEKQ 1566


>06_01_1116 + 9197761-9199956
          Length = 731

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 280 WSSIYCLAHCYTTKYTSEKTYVDEKERNKILWNQKKH 390
           +S+I C ++     YT E ++  E ERNK   NQ+ H
Sbjct: 602 FSAIMCFSYILLVYYTEEWSWPMENERNKEKCNQEFH 638


>05_06_0208 +
           26385379-26385485,26385819-26385965,26385994-26386035,
           26386231-26386275,26386375-26386544,26386779-26386864,
           26386953-26387060,26387680-26387809,26388144-26388231,
           26388511-26388555,26388639-26388808,26388931-26389016,
           26389115-26389222,26389332-26389381,26389521-26389725
          Length = 528

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 116 SIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDI 214
           S+  +K+ DF     +K P YFD RV V YP++
Sbjct: 126 SVYVMKWKDFFPNKELKEPPYFDGRV-VCYPNL 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,523,986
Number of Sequences: 37544
Number of extensions: 359571
Number of successful extensions: 692
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)