Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L20
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-11|AAC17032.1| 227|Caenorhabditis elegans Hypothetical... 149 2e-36
Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical pr... 139 3e-33
Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical p... 139 3e-33
Z92796-2|CAB07231.1| 347|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81117-9|CAB03317.2| 333|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical pr... 28 9.5
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 9.5
>AF067219-11|AAC17032.1| 227|Caenorhabditis elegans Hypothetical
protein R12E2.11 protein.
Length = 227
Score = 149 bits (362), Expect = 2e-36
Identities = 71/162 (43%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
Frame = +2
Query: 110 LFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLYDLAVKDS-QFDHLCGV 286
L+ ++ + G+F K+G TP Y DLR I+S P ++ + + + + V + +FD++ GV
Sbjct: 37 LYQMECFRTGEFYLKSGQMTPIYIDLRRIMSSPRVLRMAAQAMCEKIVASNLKFDYVVGV 96
Query: 287 PYTALPIATLLSIQAKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILE 466
PY ALP+ATL+S PMLM+RKE K+YGTK+ IEG ++ T L++EDV+TSG SI E
Sbjct: 97 PYAALPLATLVSDILNVPMLMKRKEAKAYGTKQLIEGVYQPGGTVLLVEDVVTSGESIRE 156
Query: 467 TVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKSLFTM 592
T + ++NE L+ T+A +LDR+QG NLA++ ++ S TM
Sbjct: 157 TAEAIRNENLLVTDAIAVLDRQQGATANLAEDNLNFLSFLTM 198
>Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 139 bits (336), Expect = 3e-33
Identities = 71/172 (41%), Positives = 107/172 (62%), Gaps = 2/172 (1%)
Frame = +2
Query: 89 RKXLALKLFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLY-DLAVKDSQ 265
++ L ++ KFG+F K+G +P Y DLR +P ++ L S + + + + Q
Sbjct: 14 KRNLLRQMLKASVFKFGEFQLKSGQISPIYIDLRECFGHPGLLMLISEAISKQVEISEVQ 73
Query: 266 FDHLCGVPYTALPIATLLSIQ-AKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVI 442
+ + G+PY ALP A++ + KKP+L+ RKE KSYGTKK IEG ++ +D ++IEDV+
Sbjct: 74 YAGVLGIPYAALPYASVAAGNYLKKPLLIVRKEAKSYGTKKLIEGLYQPNDRLILIEDVV 133
Query: 443 TSGSSILETVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKSLFTMRT 598
T+G SIL+ VK L E LV ++ ILDREQGGR+ L G+ + SL M+T
Sbjct: 134 TTGGSILDVVKVLHTENLVASDVFCILDREQGGRQKLQDAGVTLHSLLDMQT 185
>Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 139 bits (336), Expect = 3e-33
Identities = 71/172 (41%), Positives = 107/172 (62%), Gaps = 2/172 (1%)
Frame = +2
Query: 89 RKXLALKLFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLY-DLAVKDSQ 265
++ L ++ KFG+F K+G +P Y DLR +P ++ L S + + + + Q
Sbjct: 14 KRNLLRQMLKASVFKFGEFQLKSGQISPIYIDLRECFGHPGLLMLISEAISKQVEISEVQ 73
Query: 266 FDHLCGVPYTALPIATLLSIQ-AKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVI 442
+ + G+PY ALP A++ + KKP+L+ RKE KSYGTKK IEG ++ +D ++IEDV+
Sbjct: 74 YAGVLGIPYAALPYASVAAGNYLKKPLLIVRKEAKSYGTKKLIEGLYQPNDRLILIEDVV 133
Query: 443 TSGSSILETVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKSLFTMRT 598
T+G SIL+ VK L E LV ++ ILDREQGGR+ L G+ + SL M+T
Sbjct: 134 TTGGSILDVVKVLHTENLVASDVFCILDREQGGRQKLQDAGVTLHSLLDMQT 185
>Z92796-2|CAB07231.1| 347|Caenorhabditis elegans Hypothetical
protein H25K10.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 274 FVWSSIYCLAHCYTTKYTSEKTYVDEKERNKILWNQKK 387
F W+S+ C A C + T+ + + R+ LWN K+
Sbjct: 112 FAWTSVICQAMCVSVLATNRLSAILFPHRHFQLWNSKR 149
>Z81117-9|CAB03317.2| 333|Caenorhabditis elegans Hypothetical
protein T06E6.8 protein.
Length = 333
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -2
Query: 390 MLFLVP*DFVSFLLINIGFFACILSSVAMGKAVYGTPH--K*SNWLSFTAKSYNI-FEVS 220
M+F+ DF + L ++G AC L + + ++ TP K W+ F A ++I F++S
Sbjct: 1 MIFMESPDFFFYTLHSMGAVACPLQILGLYCILFKTPQSMKSVKWVLFNAHIWSILFDIS 60
>Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical
protein F46B6.9 protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 277 VWSSIYCLAHCYTTKYTSEKTYVDEKER 360
+W+ + CLAH T K ++ Y E+ER
Sbjct: 153 IWTIVQCLAHSDTKKLRADFMYWIEEER 180
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +2
Query: 401 FKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEA 511
F+KD+ ++ VIT+ ++ + +++LKNE LV +EA
Sbjct: 487 FRKDEN---LKKVITAEINVNKCLQNLKNESLVISEA 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,537,558
Number of Sequences: 27780
Number of extensions: 351324
Number of successful extensions: 811
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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