Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L19
(950 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 27 1.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.4
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 3.1
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 30 3.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.1
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.4
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 5.4
03_02_0122 - 5742530-5743705 29 7.2
01_06_0046 + 25943183-25943590 29 7.2
12_02_0299 - 17051570-17052474,17053542-17053755 25 8.3
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787... 23 8.8
03_02_0342 - 7645323-7645909,7646323-7646491 28 9.5
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 507 PPPPPPGXXXGXFFFXXPPXXXXXPXXKKXXXPXXXXXXGGGXGFSXPP 653
PPPPPP G F P GGG G + PP
Sbjct: 82 PPPPPPMGAPGFGPFRWSPRPLRGAPLAAWDAASPVRSGGGGGGGTGPP 130
Score = 22.2 bits (45), Expect(2) = 1.3
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +3
Query: 474 WLXFFSXXKXXPPPPPP 524
W+ PPPPPP
Sbjct: 43 WIRRLHLLPHQPPPPPP 59
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXP 582
PP PP G F PPPP P P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPP 571
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPPXXXXXXGGGXXFXXPP 654
PP PP PPPP P + PP G G F PP
Sbjct: 620 PPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPP--PPAPGIGNKFPAPP 666
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXP 582
PP PP F PPPP P P
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPP 572
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +1
Query: 490 PXXKXNPPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
P K PP PP + G PPPP P K + PP
Sbjct: 593 PAPKAAPPPPPPKSTGPGPP-RPPPPAMPGSSKTRPPPP 630
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 505 NPPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPPXXXXXXGGGXXFXXPPXXXG 666
+PP P PPP P P K PP G G PP G
Sbjct: 568 SPPAPQAPMPPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPG 621
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 529 SPGGGGGGXFXXXEKNXNHXPPPXGGGE 446
SPGGGGGG KN N P GE
Sbjct: 94 SPGGGGGGKKKKKNKNKNKNPANGQPGE 121
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -3
Query: 711 GXXPPXFFXGKKIYPPPXXXGGXKXLPPPXXXXXXGG 601
G PP G PPP GG +PPP GG
Sbjct: 1096 GVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGG 1132
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +1
Query: 490 PXXKXNPPXPPXEXXGXXFFFXPPPPXX--PXPXKKKXXPPXXXXXXGGGXXFXXPPXXX 663
P K PP PP + PPPP P P K P GG PP
Sbjct: 330 PPPKAAPPPPPPKGP------PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383
Query: 664 GG 669
GG
Sbjct: 384 GG 385
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
P PP F PPPP P P + PP
Sbjct: 415 PQSPPPPLPSDAFEQPPPPPEHPPPPESTSPPP 447
>03_02_0122 - 5742530-5743705
Length = 391
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 547 KKXPXXSPGGGGGGXFXXXEKNXNHXPPPXGGG 449
KK P GGG GG E N P GGG
Sbjct: 143 KKKPTSGGGGGYGGGRYEEEDNYKKKPTSGGGG 175
>01_06_0046 + 25943183-25943590
Length = 135
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/48 (29%), Positives = 18/48 (37%)
Frame = +1
Query: 490 PXXKXNPPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPPXXXXXXGGG 633
P +PP P +++ PPPP P PP GGG
Sbjct: 44 PVLYPSPPPPALPPPPPYYYYSPPPPAY-YPGSYCPPPPAAYVQFGGG 90
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 24.6 bits (51), Expect(2) = 8.3
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +3
Query: 507 PPPPPPGXXXGXFFFXXPPXXXXXP 581
PPPPPP F + PP P
Sbjct: 322 PPPPPPPPPPPSFPWPFPPLAPLFP 346
Score = 22.2 bits (45), Expect(2) = 8.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 483 FFSXXKXXPPPPPP 524
F+ PPPPPP
Sbjct: 316 FYPSPPPPPPPPPP 329
>01_01_0995 +
7875273-7875495,7876196-7876274,7876422-7876536,
7878507-7878761
Length = 223
Score = 23.4 bits (48), Expect(2) = 8.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 562 GGXXKKKXPXXSPGGGGGG 506
GG ++K GGGGGG
Sbjct: 5 GGDEREKAKGGGGGGGGGG 23
Score = 23.4 bits (48), Expect(2) = 8.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 523 GGGGGGXFXXXEKNXNHXPP 464
GGGGGG + + ++ PP
Sbjct: 21 GGGGGGEYGTFQGPPSYPPP 40
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 544 FFFXPPPPXXPXPXKKKXXPP 606
F F PPPP P P + PP
Sbjct: 169 FMFAPPPPPPPRPPAPEYKPP 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,794,730
Number of Sequences: 37544
Number of extensions: 439386
Number of successful extensions: 3987
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3510
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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