Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L19
(950 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 4.9
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 29 4.9
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 23 7.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
PP PP PPPP P P K PP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 490 PXXKXNPPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
P PP PP G PPPP P P K PP
Sbjct: 752 PPISGGPPPPPPPPGGC-----PPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 490 PXXKXNPPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
P PP PP G PPPP P P K PP
Sbjct: 752 PPISGGPPPPPPPPGGC-----PPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 490 PXXKXNPPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
P PP PP G PPPP P P K PP
Sbjct: 335 PPISGGPPPPPPPPGGC-----PPPPPPPPPGGFKGGPP 368
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 5/71 (7%)
Frame = +3
Query: 507 PPPPPP-----GXXXGXFFFXXPPXXXXXPXXKKXXXPXXXXXXGGGXGFSXPPXXXGGG 671
PPPPPP G G PP P GGG G P GGG
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGGCGGGVAPAPIGGG 90
Query: 672 IFFXXKKNXGG 704
+ GG
Sbjct: 91 YAQAPQAPIGG 101
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 523 GGGGGGXFXXXEKNXNHXPPPXGGG 449
GGG GG N N PPP G G
Sbjct: 357 GGGSGGPGNSQFSNFNQRPPPSGNG 381
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 462 GGGXWLXFFSXXKXXPPPPPP 524
GGG F PPPPPP
Sbjct: 217 GGGNNGFFVPVPVVIPPPPPP 237
Score = 23.4 bits (48), Expect(2) = 7.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 507 PPPPPPG 527
PPPPPPG
Sbjct: 234 PPPPPPG 240
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 670 PPPXXXGGXEXPXPPP 623
PPP GG E P PPP
Sbjct: 43 PPPPCGGGYEAPPPPP 58
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
PP P +F PPPP P + + PP
Sbjct: 127 PPAPSVPLLHDRYFVPPPPPVPPRHSRVQQSPP 159
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +1
Query: 508 PPXPPXEXXGXXFFFXPPPPXXPXPXKKKXXPP 606
PP P +F PPPP P + + PP
Sbjct: 127 PPAPSVPLLHDRYFVPPPPPVPPRHSRVQQSPP 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,817,915
Number of Sequences: 27780
Number of extensions: 235484
Number of successful extensions: 1468
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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