Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L18
         (929 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.81 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.4  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   10.0 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   10.0 

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 0.81
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 750 FPPGKPPXXXLXSPPXPPXQEPLXPSXPP 836
           FP G P       PP PP   P+ P   P
Sbjct: 569 FPAGFPNLPNAQPPPAPPPPPPMGPPPSP 597



 Score = 24.2 bits (50), Expect = 5.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 181 PSPXPPPPXRXXGGPXXXNPL 243
           P+P PPPP      P    PL
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPL 603



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = -2

Query: 487 FPGDPXSXPXPXPLXPXPRXXEXXXXXPPPXPXXXXIXGG 368
           FP  P + P P P  P P         PPP P      GG
Sbjct: 573 FPNLPNAQPPPAPPPPPP-------MGPPPSPLAGGPLGG 605


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/42 (33%), Positives = 15/42 (35%)
 Frame = +3

Query: 180 PFPXPPPPXQXXRRPXXXXPPVEGGXTPPXXKKKKGEXXXTP 305
           P P  PP  Q  R P    PP  G  T P   +  G     P
Sbjct: 181 PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = +2

Query: 392 GXGGGGXXXXFXGTGXRGEGXGXWGTXG 475
           G GGGG        G RG G G  G  G
Sbjct: 63  GYGGGGRGGRGGRGGGRGRGRGRGGRDG 90


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 246 PQGVXXXXASXXPGXGGGXGGR 181
           P G         PG GGG GGR
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGGR 233


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 12/43 (27%), Positives = 14/43 (32%)
 Frame = +3

Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPPL 872
           P   PG P    L   P  P   P+    PP         PP+
Sbjct: 89  PGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMGMPPM 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.148    0.527 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,286
Number of Sequences: 2352
Number of extensions: 6411
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101295495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)