Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L18
(929 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.22
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.38
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 33 0.38
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.38
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.89
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.89
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.89
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 2.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.7
U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachme... 29 4.7
U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachme... 29 4.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 5.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 5.4
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.3
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 6.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.3
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 6.3
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 29 6.3
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 29 6.3
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 6.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 28 8.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 28 8.3
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = -1
Query: 617 PXVXGGXXGPPXGXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXPGRPPKXPTXQXPXPX 438
P + GG PP P GPP P P PG P P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP---PGGLPPITGGPPPPPPPGGLP--PISGGPPPP 761
Query: 437 PPXX*KXXKXPPPXP 393
PP PPP P
Sbjct: 762 PPPPGGCPPPPPPPP 776
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = -1
Query: 617 PXVXGGXXGPPX--GXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXPGRPPKXPTXQXPX 444
P + GG PP G P + G P P P P PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPP------PPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 443 PXPPXX*KXXKXPPPXP 393
P PP K PPP P
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPP 836
P PPG PP PP PP P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = -1
Query: 617 PXVXGGXXGPPXGXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXPGRPPKXPTXQXPXPX 438
P + GG PP P GPP P P PG P P P P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPP---PGGLPPITGGPPPPPPPGGLP--PISGGPPPP 761
Query: 437 PPXX*KXXKXPPPXP 393
PP PPP P
Sbjct: 762 PPPPGGCPPPPPPPP 776
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = -1
Query: 617 PXVXGGXXGPPX--GXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXPGRPPKXPTXQXPX 444
P + GG PP G P + G P P P P PP P
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPP------PPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 443 PXPPXX*KXXKXPPPXP 393
P PP K PPP P
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPP 836
P PPG PP PP PP P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/75 (30%), Positives = 24/75 (32%)
Frame = -1
Query: 617 PXVXGGXXGPPXGXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXPGRPPKXPTXQXPXPX 438
P + GG PP P GPP P P PG P P P P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPP---PGGLPPITGGPPPPPPPGGLP--PISGGPPPP 344
Query: 437 PPXX*KXXKXPPPXP 393
PP PPP P
Sbjct: 345 PPPPGGCPPPPPPPP 359
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 2/77 (2%)
Frame = -1
Query: 617 PXVXGGXXGPPX--GXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXPGRPPKXPTXQXPX 444
P + GG PP G P + G P P P P PP P
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPP------PPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 443 PXPPXX*KXXKXPPPXP 393
P PP K PPP P
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPP 836
P PPG PP PP PP P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPPXXR 845
P PPG PP PP PP + P P PP R
Sbjct: 246 PPGPPG-PPTRRPPGPPGPPTRRPPGPPGPPTRR 278
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPP 869
P PPG P PP PP + P P PP R PP
Sbjct: 240 PSDPPGPP------GPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 433 GGXGXGXWXVGXXGGRPGXGXXXSXXXXXXXXXXXXHGXXXGGPQSXGXPXGGPXXPPXT 612
GG G G GG PG G HG G P G P GGP P
Sbjct: 159 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP-GGPGGPGGP 217
Query: 613 XG 618
G
Sbjct: 218 GG 219
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = +1
Query: 433 GGXGXGXWXVGXXGGRPGXGXXXSXXXXXXXXXXXXHGXXXGGPQSXGXPXGGPXXPPXT 612
GG G G GG PG G HG G P G P GGP P
Sbjct: 439 GGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGP-GGPGGPGGP 497
Query: 613 XG 618
G
Sbjct: 498 GG 499
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = -1
Query: 605 GGXXGPPXGXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXP--GRPPKXPTXQXPXP--- 441
G PP G P PP P P P G PP PT P P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Query: 440 -XPPXX*KXXKXPPPXP 393
PP PPP P
Sbjct: 287 GSPPPPRAGSPPPPPPP 303
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 759 GKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPP 869
G PP SPP PP Q+ P P T +PP
Sbjct: 319 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 355
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = +3
Query: 744 PXFPP--GKPPXXXLXSPPXPPXQEPLXP---SXPPXXRWXKTXTPP 869
P PP G PP SPP PP P P PP R PP
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = -1
Query: 605 GGXXGPPXGXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXP--GRPPKXPTXQXPXP--- 441
G PP G P PP P P P G PP PT P P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Query: 440 -XPPXX*KXXKXPPPXP 393
PP PPP P
Sbjct: 308 GSPPPPRAGSPPPPPPP 324
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 759 GKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPP 869
G PP SPP PP Q+ P P T +PP
Sbjct: 340 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 376
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = +3
Query: 744 PXFPP--GKPPXXXLXSPPXPPXQEPLXP---SXPPXXRWXKTXTPP 869
P PP G PP SPP PP P P PP R PP
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.89
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = -1
Query: 605 GGXXGPPXGXPXLWGPPXXXPCXXXXXXXXXXXXXXXXPXP--GRPPKXPTXQXPXP--- 441
G PP G P PP P P P G PP PT P P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Query: 440 -XPPXX*KXXKXPPPXP 393
PP PPP P
Sbjct: 293 GSPPPPRAGSPPPPPPP 309
Score = 31.5 bits (68), Expect = 0.89
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = +3
Query: 759 GKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPP 869
G PP SPP PP Q+ P P T +PP
Sbjct: 325 GSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPP 361
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Frame = +3
Query: 744 PXFPP--GKPPXXXLXSPPXPPXQEPLXP---SXPPXXRWXKTXTPP 869
P PP G PP SPP PP P P PP R PP
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 184 SPXPPPPXRXXGGPXXXNPLWRGGKXPXXXKKK 282
+P PPPP GGP P + G P + K
Sbjct: 53 APPPPPPPSYAGGPSYAGPSYAGSYGPGPYRAK 85
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/102 (25%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +2
Query: 185 PPXPPPXPGXXEAXXXXTPCGGGXNXPXXXKKKRGXXXXPXKXGEKXXPXXXQXTXKXQX 364
PP PP PG + P G P + G P G+ P
Sbjct: 256 PPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPP 315
Query: 365 XXPXYXXXTG---XGGGGXXXXFXGTGXRGEGXGXWGTXGVA 481
P G GGGG G G R + G G G A
Sbjct: 316 RTPAGGGGGGDFPAGGGGGGYSTGGGGGRADSGGAAGGAGGA 357
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPP 836
P PP P + PP PP P+ P PP
Sbjct: 49 PICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 491 PXPGRPPKXPTXQXPXPXPPXX*KXXKXPPP 399
P P PP+ PT + P P P + PPP
Sbjct: 546 PTPPPPPREPTPREPTPEPEPVREPTPPPPP 576
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +3
Query: 735 KXXPXFPPGKPPXXXLXS---PPXPPXQEPLXPSXPPXXRWXKTXTPPLYPXXEXXXRFX 905
K P PP PP + PP PP P + PP PP+
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPP---------PPILGLKTPSKSLK 114
Query: 906 XPTPRPE 926
PTPRP+
Sbjct: 115 TPTPRPK 121
>U80952-2|AAB38094.1| 309|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform a protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPPLYP 878
P PG+ P L PP P Q P P PP + + +PP P
Sbjct: 53 PIHVPGREPPRMLL-PPTPHFQAPFSPHPPPVQQ-VPSYSPPHAP 95
>U80952-1|AAU20846.1| 315|Caenorhabditis elegans Muscle attachment
abnormal protein1, isoform b protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 744 PXFPPGKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPPLYP 878
P PG+ P L PP P Q P P PP + + +PP P
Sbjct: 59 PIHVPGREPPRMLL-PPTPHFQAPFSPHPPPVQQ-VPSYSPPHAP 101
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +3
Query: 753 PPGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PPG PP L +PP PP P+ PP
Sbjct: 695 PPGVPPMFNLNAPP-PPGIPGYPPAPPP 721
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.2 bits (55), Expect(2) = 5.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 181 PSPXPPPPXRXXGGP 225
P P PPPP GGP
Sbjct: 649 PPPPPPPPPSGAGGP 663
Score = 21.0 bits (42), Expect(2) = 5.3
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +1
Query: 160 PFXKHXXPSPXPPPP 204
P P P PPPP
Sbjct: 624 PISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.2 bits (55), Expect(2) = 5.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 181 PSPXPPPPXRXXGGP 225
P P PPPP GGP
Sbjct: 475 PPPPPPPPPSGAGGP 489
Score = 21.0 bits (42), Expect(2) = 5.4
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +1
Query: 160 PFXKHXXPSPXPPPP 204
P P P PPPP
Sbjct: 450 PISSAAPPPPPPPPP 464
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCDPITPP 143
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 84 PGKPGAPGLPGNPGHPPQQPCDPITPP 110
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCDPITPP 143
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 753 PPGKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPPLYP 878
PP PP + P PP + P PP +T PP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP-GRTPGPPGMP 314
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 753 PPGKPPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPPLYP 878
PP PP + P PP + P PP +T PP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP-GRTPGPPGMP 324
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P Q+P P PP
Sbjct: 117 PGKPGAPGLPGNPGRPPQQPCEPITPP 143
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P +EP P PP
Sbjct: 107 PGKPGAPGLNGNPGRPPKEPCEPITPP 133
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 186 PXPPPPXQXXRRPXXXXPPVEGGXTPPXXKKKKGEXXXTPK 308
P PPPP P PP TPP +++ +P+
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE 179
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 756 PGKPPXXXLXSPPXPPXQEPLXPSXPP 836
PGKP L P P +EP P PP
Sbjct: 109 PGKPGAPGLNGNPGRPPKEPCEPLTPP 135
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +3
Query: 765 PPXXXLXSPPXPPXQEPLXPSXPPXXRWXKTXTPPLYP 878
PP + PP P Q P PP PPL P
Sbjct: 1279 PPANTIMPPPPPYNQASAVPLNPPRTALPPLQLPPLQP 1316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.148 0.527
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,399,031
Number of Sequences: 27780
Number of extensions: 228917
Number of successful extensions: 1535
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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