Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L16
(888 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein. 31 4.2
BC029660-1|AAH29660.1| 309|Homo sapiens USP24 protein protein. 31 5.6
AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protei... 31 5.6
AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protei... 31 5.6
AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protei... 31 5.6
AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protei... 31 5.6
AK091431-1|BAC03664.1| 992|Homo sapiens protein ( Homo sapiens ... 31 5.6
AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein. 31 5.6
AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein. 31 5.6
AB028980-1|BAA83009.1| 977|Homo sapiens KIAA1057 protein protein. 31 5.6
BC039311-1|AAH39311.1| 996|Homo sapiens transforming, acidic co... 31 7.4
AL713712-1|CAD28509.1| 807|Homo sapiens hypothetical protein pr... 31 7.4
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co... 31 7.4
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co... 31 7.4
AL135793-4|CAI95129.1| 832|Homo sapiens transforming, acidic co... 31 7.4
AL135793-3|CAI95128.1| 906|Homo sapiens transforming, acidic co... 31 7.4
AL135793-2|CAI95127.1| 1026|Homo sapiens transforming, acidic co... 31 7.4
AL135793-1|CAI95126.1| 1038|Homo sapiens transforming, acidic co... 31 7.4
AK000321-1|BAA91084.1| 309|Homo sapiens protein ( Homo sapiens ... 31 7.4
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi... 31 7.4
AF528098-1|AAO62629.1| 1094|Homo sapiens transforming acidic coi... 31 7.4
AF220152-1|AAF29537.2| 906|Homo sapiens TACC2 protein. 31 7.4
AF095791-1|AAC64968.2| 1026|Homo sapiens TACC2 protein protein. 31 7.4
>AF006514-1|AAB87382.1| 1739|Homo sapiens CHD2 protein.
Length = 1739
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +2
Query: 107 NPS*RGSVSLSYFFRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADS 286
NPS G V ++ P+KK +K+K K N+E S + E ++ + +D S
Sbjct: 1371 NPSEEGEVKDDGLEKS-PMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKPKS 1429
Query: 287 NEPASRTGRKRVSKAPVNNT 346
+ S + KR S+ PV+ T
Sbjct: 1430 GDAKSSSKSKR-SQGPVHIT 1448
>BC029660-1|AAH29660.1| 309|Homo sapiens USP24 protein protein.
Length = 309
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 71 EVKHEYWLPQK*NPS*RGSVSLSYFFRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQ 250
++ YW PQ N S S + F RTI + + LNE++ GS G+E
Sbjct: 223 KMSEHYWTPQS-NVSNETSTGKT-FQRTISAQDTLAYATALLNEKEQSGSSNGSESSPAN 280
Query: 251 DSGE 262
++G+
Sbjct: 281 ENGD 284
>AY223817-1|AAP41105.1| 863|Homo sapiens Cohen syndrome 1 protein
splice variant 3 protein.
Length = 863
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protein
splice variant 2 protein.
Length = 1427
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protein
splice variant 1 protein.
Length = 3997
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protein
protein.
Length = 4022
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AK091431-1|BAC03664.1| 992|Homo sapiens protein ( Homo sapiens
cDNA FLJ34112 fis, clone FCBBF3008870. ).
Length = 992
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 83 LKSDIKNENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 127
>AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.
Length = 3997
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKDENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.
Length = 4022
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 545 LKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMESNGRVLHKCTCVYSGVE 706
LKSD+K + +T+++ +E+ ALL+++IP L KCTC S E
Sbjct: 612 LKSDIKDENETILNP-EEV--------ALLEEYIPTRHTSVTLLKCTCTISMAE 656
>AB028980-1|BAA83009.1| 977|Homo sapiens KIAA1057 protein protein.
Length = 977
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 71 EVKHEYWLPQK*NPS*RGSVSLSYFFRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQ 250
++ YW PQ N S S + F RTI + + LNE++ GS G+E
Sbjct: 891 KMSEHYWTPQS-NVSNETSTGKT-FQRTISAQDTLAYATALLNEKEQSGSSNGSESSPAN 948
Query: 251 DSGE 262
++G+
Sbjct: 949 ENGD 952
>BC039311-1|AAH39311.1| 996|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 996
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 153 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 207
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 208 PRPPSLKKKQ 217
>AL713712-1|CAD28509.1| 807|Homo sapiens hypothetical protein
protein.
Length = 807
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 11 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 65
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 66 PRPPSLKKKQ 75
>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2948
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 2075 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 2129
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 2130 PRPPSLKKKQ 2139
>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 2675
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 1802 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 1856
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 1857 PRPPSLKKKQ 1866
>AL135793-4|CAI95129.1| 832|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 832
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 10 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 64
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 65 PRPPSLKKKQ 74
>AL135793-3|CAI95128.1| 906|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 906
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 110 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 164
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 165 PRPPSLKKKQ 174
>AL135793-2|CAI95127.1| 1026|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 1026
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 153 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 207
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 208 PRPPSLKKKQ 217
>AL135793-1|CAI95126.1| 1038|Homo sapiens transforming, acidic
coiled-coil containing protein 2 protein.
Length = 1038
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 153 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 207
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 208 PRPPSLKKKQ 217
>AK000321-1|BAA91084.1| 309|Homo sapiens protein ( Homo sapiens
cDNA FLJ20314 fis, clone HEP07831. ).
Length = 309
Score = 30.7 bits (66), Expect = 7.4
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 71 EVKHEYWLPQK*NPS*RGSVSLSYFFRTIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQ 250
++ YW PQ N S S + F RTI + + LNE + GS G+E
Sbjct: 223 KMSEHYWTPQS-NVSNETSTGKT-FQRTISAQDTLAYATALLNEREQSGSSNGSESSPAN 280
Query: 251 DSGE 262
++G+
Sbjct: 281 ENGD 284
>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
coil 2, long isoform protein.
Length = 2948
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 2075 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 2129
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 2130 PRPPSLKKKQ 2139
>AF528098-1|AAO62629.1| 1094|Homo sapiens transforming acidic coiled
coil 2, short isoform protein.
Length = 1094
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 221 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 275
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 276 PRPPSLKKKQ 285
>AF220152-1|AAF29537.2| 906|Homo sapiens TACC2 protein.
Length = 906
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 110 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 164
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 165 PRPPSLKKKQ 174
>AF095791-1|AAC64968.2| 1026|Homo sapiens TACC2 protein protein.
Length = 1026
Score = 30.7 bits (66), Expect = 7.4
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 152 TIPIKKMRKRKSLKLNEEDSDGSGQGAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKA 331
++PI K +SL L D DG+ PE PDA S +S + + +K
Sbjct: 153 SVPISKSTLSRSLSLQASDFDGASSSGNPEAVA-----LAPDAYSTGSSSASSTLKRTKK 207
Query: 332 PVNNTKKKRK 361
P + KK++
Sbjct: 208 PRPPSLKKKQ 217
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,568,587
Number of Sequences: 237096
Number of extensions: 2477666
Number of successful extensions: 6671
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6660
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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