Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L14
(894 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1... 63 1e-08
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 63 1e-08
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 63 1e-08
UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Hist... 63 1e-08
UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella ve... 63 1e-08
UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4... 63 1e-08
UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone... 62 2e-08
UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep... 62 2e-08
UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4... 58 3e-07
UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 50 6e-05
UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago... 50 1e-04
UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep... 46 0.001
UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania braziliensi... 43 0.009
UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania braziliensi... 43 0.009
UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep: H... 42 0.021
UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histo... 42 0.028
UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep: H... 42 0.028
UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Re... 40 0.086
UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA bindin... 39 0.20
UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana... 39 0.20
UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania braziliensi... 37 0.60
UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides im... 36 1.8
UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon cunicu... 36 1.8
UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa... 33 7.4
UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium tetraurelia... 33 7.4
>UniRef50_UPI0000660B5F Cluster: H4 histone family, member L; n=1;
Takifugu rubripes|Rep: H4 histone family, member L -
Takifugu rubripes
Length = 220
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHAKRKTVTAMDVVYALK+
Sbjct: 177 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 210
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 208 ARRGGVKRISGLIYEETRSVLKVFLE 285
ARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 156 ARRGGVKRISGLIYEETRGVLKVFLE 181
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>UniRef50_Q4SKJ3 Cluster: Histone H4; n=3; Euteleostomi|Rep: Histone
H4 - Tetraodon nigroviridis (Green puffer)
Length = 234
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHAKRKTVTAMDVVYALK+
Sbjct: 191 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 224
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 169 LARRGGVKRISGLIYEETRGVLKVFLE 195
>UniRef50_A7SHX4 Cluster: Predicted protein; n=9; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 222
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>UniRef50_P62805 Cluster: Histone H4; n=364; root|Rep: Histone H4 -
Homo sapiens (Human)
Length = 103
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>UniRef50_A3BZ47 Cluster: Histone H4; n=2; Eukaryota|Rep: Histone H4
- Oryza sativa subsp. japonica (Rice)
Length = 285
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 242 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 275
Score = 54.0 bits (124), Expect = 5e-06
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 220 LARRGGVKRISGLIYEETRGVLKIFLE 246
>UniRef50_Q01FF9 Cluster: Histone H4; n=1; Ostreococcus tauri|Rep:
Histone H4 - Ostreococcus tauri
Length = 282
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 209 KVFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 242
Score = 54.4 bits (125), Expect = 4e-06
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 187 LARRGGVKRISGLIYEETRGVLKVFLE 213
>UniRef50_P80739 Cluster: Histone H4; n=143; root|Rep: Histone H4 -
Euplotes crassus
Length = 107
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
F +VIRD+VTYTEHAKRKTVTA+DVVYALK+
Sbjct: 66 FLESVIRDSVTYTEHAKRKTVTALDVVYALKR 97
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRIS L+YEETR+VLK FLE
Sbjct: 42 LARRGGVKRISSLVYEETRAVLKGFLE 68
>UniRef50_A0BJB4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 107
Score = 50.4 bits (115), Expect = 6e-05
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKKAREN 385
F ++++DA+ YTEHA+R TV AMDVVYALKK N
Sbjct: 66 FLSSLVKDAIIYTEHAQRNTVQAMDVVYALKKYGRN 101
Score = 33.1 bits (72), Expect = 9.8
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFL 282
LARRGGVKRIS Y TR V+ FL
Sbjct: 42 LARRGGVKRISSDSYPTTRDVIVNFL 67
>UniRef50_A2Q2T8 Cluster: Histone H4; Histone-fold; n=1; Medicago
truncatula|Rep: Histone H4; Histone-fold - Medicago
truncatula (Barrel medic)
Length = 289
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVY 361
+ F +N I DAVTYTEHA+RKT+TAMDVVY
Sbjct: 33 KIFLQNEICDAVTYTEHARRKTLTAMDVVY 62
>UniRef50_A4QW60 Cluster: Histone H4; n=1; Magnaporthe grisea|Rep:
Histone H4 - Magnaporthe grisea (Rice blast fungus)
(Pyricularia grisea)
Length = 144
Score = 46.4 bits (105), Expect = 0.001
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLEK 288
LARRGGVKR+SG+IY+ETR +K +LE+
Sbjct: 66 LARRGGVKRLSGMIYDETRGAMKQYLER 93
Score = 34.7 bits (76), Expect = 3.2
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ ++RD V Y ++ + KTVT DV++ALK+
Sbjct: 90 YLERILRDCVAYCDYRRAKTVTVHDVLHALKR 121
>UniRef50_A4HNK8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 145
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
+ARRGGVKRISG +YEE R VLK ++E
Sbjct: 81 MARRGGVKRISGDLYEEVRRVLKAYVE 107
Score = 39.1 bits (87), Expect = 0.15
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ +++R + YTE+A++KTVTA DVV AL+K
Sbjct: 105 YVEDIVRCSTAYTEYARKKTVTAADVVNALRK 136
>UniRef50_A4HBJ5 Cluster: Histone H4; n=1; Leishmania
braziliensis|Rep: Histone H4 - Leishmania braziliensis
Length = 106
Score = 43.2 bits (97), Expect = 0.009
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
+ARRGGVKRISG +YEE R VLK ++E
Sbjct: 1 MARRGGVKRISGDLYEEVRRVLKAYVE 27
>UniRef50_Q6A1P4 Cluster: Histone H4; n=1; Euplotes vannus|Rep:
Histone H4 - Euplotes vannus
Length = 125
Score = 41.9 bits (94), Expect = 0.021
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLEK 288
LARRGG+KRIS +YEE R + VFLEK
Sbjct: 42 LARRGGIKRISADVYEELRKIYIVFLEK 69
Score = 39.1 bits (87), Expect = 0.15
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKKAREN 385
F ++ D+ +Y + AKRKT+ +DVVYALK+ N
Sbjct: 66 FLEKLVEDSYSYADCAKRKTIIPLDVVYALKRQGRN 101
>UniRef50_Q4QFI3 Cluster: Histone h4; n=19; Leishmania|Rep: Histone
h4 - Leishmania major
Length = 100
Score = 41.5 bits (93), Expect = 0.028
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
+ARRGGVKRIS +YEE R VLK ++E
Sbjct: 36 MARRGGVKRISSEVYEEVRRVLKAYVE 62
Score = 39.1 bits (87), Expect = 0.15
Identities = 16/32 (50%), Positives = 25/32 (78%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ +++R + YTE+A++KTVTA DVV AL+K
Sbjct: 60 YVEDIVRCSTAYTEYARKKTVTACDVVNALRK 91
>UniRef50_Q7RX38 Cluster: Histone H4; n=3; Sordariomycetes|Rep:
Histone H4 - Neurospora crassa
Length = 155
Score = 41.5 bits (93), Expect = 0.028
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 290 VIRDAVTYTEHAKRKTVTAMDVVYALKK 373
++RD VTYTEH KTVT DV++AL++
Sbjct: 83 ILRDCVTYTEHRHAKTVTVTDVIFALRR 110
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
+ RRGGVKRIS IY+E R+ LK L+
Sbjct: 55 ITRRGGVKRISAGIYDEIRAALKERLQ 81
>UniRef50_Q8TA36 Cluster: Histone H4; n=1; Heterodera glycines|Rep:
Histone H4 - Heterodera glycines (Soybean cyst nematode
worm)
Length = 170
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 209 RXAAASNVSPA*FTRKHAAF*RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
R A + ++ + AA R + +IRDA Y +H +RKT+ + DVV+AL++
Sbjct: 38 RRAGVARINARVYDEVRAAL-RSYLETIIRDAAIYCQHERRKTMKSRDVVHALRR 91
Score = 33.9 bits (74), Expect = 5.6
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARR GV RI+ +Y+E R+ L+ +LE
Sbjct: 36 LARRAGVARINARVYDEVRAALRSYLE 62
>UniRef50_UPI0000E47984 Cluster: PREDICTED: similar to RNA binding
motif, single stranded interacting protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
RNA binding motif, single stranded interacting protein -
Strongylocentrotus purpuratus
Length = 329
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 229 RISGLIYEETRSVLKVFLE 285
RISGLIYEETR VLKVFLE
Sbjct: 118 RISGLIYEETRGVLKVFLE 136
Score = 37.1 bits (82), Expect = 0.60
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKT 337
+ F NVIRDAVTY EHAK+KT
Sbjct: 132 KVFLENVIRDAVTYCEHAKQKT 153
>UniRef50_A6S8Z2 Cluster: Histone H4; n=1; Botryotinia fuckeliana
B05.10|Rep: Histone H4 - Botryotinia fuckeliana B05.10
Length = 138
Score = 38.7 bits (86), Expect = 0.20
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 287 NVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+V++D V EH+KRKTVT DV++AL++
Sbjct: 97 DVLKDCVALVEHSKRKTVTVNDVIWALRR 125
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLK 273
LARRGGVKRIS +IY + R +K
Sbjct: 70 LARRGGVKRISSMIYGDVREAIK 92
>UniRef50_A4HHY8 Cluster: Histone h4; n=1; Leishmania
braziliensis|Rep: Histone h4 - Leishmania braziliensis
Length = 131
Score = 37.1 bits (82), Expect = 0.60
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
+AR GVKRISG +YEE R VLK ++E
Sbjct: 37 MARCDGVKRISGDLYEEVRRVLKAYVE 63
Score = 33.9 bits (74), Expect = 5.6
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALKKAR 379
+ +++R + E+A++KTVTA DVV AL +AR
Sbjct: 61 YVEDIVRCSAACIEYARKKTVTASDVVNALAQAR 94
>UniRef50_Q1DKH6 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 131
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 193 PFESLARRGGVKRISGLIYEETRSVL 270
PF LARRGGVKRI IY+ R VL
Sbjct: 58 PFIRLARRGGVKRIQKSIYDTAREVL 83
>UniRef50_Q8SQP4 Cluster: Histone H4; n=1; Encephalitozoon
cuniculi|Rep: Histone H4 - Encephalitozoon cuniculi
Length = 103
Score = 35.5 bits (78), Expect = 1.8
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
R + R+ + A Y HAKRKT+T D++++LK+
Sbjct: 62 REYIRDTLSIACIYATHAKRKTITCSDILHSLKR 95
>UniRef50_Q0D5M3 Cluster: Os07g0549900 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0549900 protein -
Oryza sativa subsp. japonica (Rice)
Length = 253
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 286 KRYPGRGYLHRAR*KENRNSHGRGLR 363
+R+P R +LHRAR ++R+ HGR LR
Sbjct: 194 ERHPRRRHLHRARPPQDRHRHGRRLR 219
>UniRef50_A0CDN4 Cluster: Histone H4; n=2; Paramecium
tetraurelia|Rep: Histone H4 - Paramecium tetraurelia
Length = 116
Score = 33.5 bits (73), Expect = 7.4
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFL 282
LARRGGVKRIS +YE ++ +K+++
Sbjct: 51 LARRGGVKRISSDVYELSKLYMKLYI 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,842,844
Number of Sequences: 1657284
Number of extensions: 4750841
Number of successful extensions: 10194
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10191
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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