Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L14
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0780 - 20500344-20500655 62 6e-10
09_06_0213 - 21610887-21611198 62 6e-10
09_04_0227 + 15861410-15861721 62 6e-10
07_03_0825 + 21773710-21774021 62 6e-10
05_05_0150 + 22758060-22758371 62 6e-10
05_05_0128 - 22591720-22592031 62 6e-10
04_04_0926 - 29462363-29462674 62 6e-10
03_01_0134 + 1060551-1060862 62 6e-10
02_05_0333 - 28012829-28013140 62 6e-10
01_06_1262 + 35833882-35834193 62 6e-10
05_05_0130 - 22598744-22599043,22599296-22599307 54 2e-07
07_01_0167 + 1175694-1176015,1176129-1176803,1177064-1177107 29 5.0
>10_08_0780 - 20500344-20500655
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>09_06_0213 - 21610887-21611198
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>09_04_0227 + 15861410-15861721
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>07_03_0825 + 21773710-21774021
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>05_05_0150 + 22758060-22758371
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>05_05_0128 - 22591720-22592031
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>04_04_0926 - 29462363-29462674
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>03_01_0134 + 1060551-1060862
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>02_05_0333 - 28012829-28013140
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>01_06_1262 + 35833882-35834193
Length = 103
Score = 62.1 bits (144), Expect = 6e-10
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTYTEHA+RKTVTAMDVVYALK+
Sbjct: 60 KIFLENVIRDAVTYTEHARRKTVTAMDVVYALKR 93
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLK+FLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKIFLE 64
>05_05_0130 - 22598744-22599043,22599296-22599307
Length = 103
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +2
Query: 278 FSRNVIRDAVTYTEHAKRKTVTAMDVVYALK 370
F +NVI DA+TYTEHA RKTV AMDVVYALK
Sbjct: 62 FLKNVICDAITYTEHAHRKTVMAMDVVYALK 92
Score = 48.0 bits (109), Expect = 1e-05
Identities = 21/27 (77%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LAR+GGVKRISGLIY+ETR VL++FL+
Sbjct: 38 LARKGGVKRISGLIYKETRGVLEIFLK 64
>07_01_0167 + 1175694-1176015,1176129-1176803,1177064-1177107
Length = 346
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 388 SVLPCLLQSVDHVHGCYGFPFSVLCVSNRVPDNVSRE 278
S + C + DH GC+G PF+V V+N V + E
Sbjct: 109 SAVLCAVSGCDH-GGCHGGPFAVAFVANYVMEGEEEE 144
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,008,483
Number of Sequences: 37544
Number of extensions: 134630
Number of successful extensions: 320
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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