Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L14
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical p... 60 2e-09
Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical p... 60 2e-09
Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical pr... 60 2e-09
X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein... 60 2e-09
U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protei... 60 2e-09
U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protei... 60 2e-09
U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein... 60 2e-09
U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein... 60 2e-09
U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein... 60 2e-09
AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone prote... 60 2e-09
AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone prote... 60 2e-09
>Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical
protein T10C6.14 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.8 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.4 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical
protein ZK131.1 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical
protein F54E12.3 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical
protein T23D8.5 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical
protein B0035.9 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical
protein C50F4.7 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical
protein F22B3.1 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein
protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protein 5
protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protein
18 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein 28
protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein 60
protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein 38
protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone protein
31 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
>AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone protein
50 protein.
Length = 103
Score = 60.5 bits (140), Expect = 2e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 272 RFFSRNVIRDAVTYTEHAKRKTVTAMDVVYALKK 373
+ F NVIRDAVTY EHAKRKTVTAMDVVYALK+
Sbjct: 60 KVFLENVIRDAVTYCEHAKRKTVTAMDVVYALKR 93
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +1
Query: 205 LARRGGVKRISGLIYEETRSVLKVFLE 285
LARRGGVKRISGLIYEETR VLKVFLE
Sbjct: 38 LARRGGVKRISGLIYEETRGVLKVFLE 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,444,397
Number of Sequences: 27780
Number of extensions: 111576
Number of successful extensions: 254
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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