Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L13
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012...    31   0.93 
06_03_0654 + 23173253-23173812,23174365-23175262                       29   6.5  
03_02_0715 + 10621789-10623243,10624074-10625018                       29   6.5  
06_03_0652 + 23166595-23166749,23168015-23168225,23168307-23168840     28   8.6  

>07_03_1762 -
           29299328-29299437,29299782-29299871,29300487-29301291,
           29301956-29303278
          Length = 775

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 186 EWNVQETRCGCCRWRFGGITRSIIFGEERTSRSPV-RISRRHKKY 317
           EW+  E+RC  C+ RF  IT+S +      SR  V R+ +R + Y
Sbjct: 399 EWSKVESRCPLCKRRFTTITKSSMADLGLGSRKAVIRVEKRDQVY 443


>06_03_0654 + 23173253-23173812,23174365-23175262
          Length = 485

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
 Frame = +3

Query: 144 FVKYYIQHSDGEFRE---WNVQETR--CGCCRWRFGGITRSIIFG 263
           + KYY+   D   R    +NV E +  C CCR+ F  I    + G
Sbjct: 340 YSKYYVDRDDPPTRHTVFYNVAEKKAWCDCCRYAFSAILCRHVLG 384


>03_02_0715 + 10621789-10623243,10624074-10625018
          Length = 799

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +3

Query: 186 EWNVQETRCGCCRWRFGGITRSI--IFGEERTSRSPVRISRRHKKY 317
           +W+  E+RC  C+ RF  IT+S     G E T+ S +R+  R + Y
Sbjct: 443 QWSKVESRCPLCKRRFTTITKSSKEDTGLELTN-SVIRVEERDQVY 487


>06_03_0652 + 23166595-23166749,23168015-23168225,23168307-23168840
          Length = 299

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 643 TKEIVEVNADLIIGADGCIFSCTQR 717
           T E VEV  DL++ ADGC  +  +R
Sbjct: 20  TGETVEVAGDLLVAADGCTSAIRRR 44


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,388,499
Number of Sequences: 37544
Number of extensions: 491803
Number of successful extensions: 958
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)