Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L13
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical pr...   106   2e-23
Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical p...    62   5e-10
U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p4...    29   5.9  

>Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical
           protein R07B7.5 protein.
          Length = 461

 Score =  106 bits (254), Expect = 2e-23
 Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
 Frame = +1

Query: 241 SLEALFLAKRGHRVRLYEYREDIRNTPQARGRSINLALSIRGRTALREVGLEDHMINNHG 420
           +L A F A++G  V +YE+R+DIR     +GRSINLALS RG++AL  VGL+++++ N G
Sbjct: 14  ALNACFFAQKGWDVSVYEFRKDIRTMKHVQGRSINLALSQRGKSALEAVGLKEYIV-NQG 72

Query: 421 IPMKGRNIHRIDGSTYIIPYDSRTKQCIYSVGRNYLNGLLLQESEKYENVERFFNHKLIA 600
           +P+  R IH  DG TY      +  + I S+ R +LN +++ ++EK  NV+ FF HK+  
Sbjct: 73  VPLYARLIHNKDGKTYSRQPYGKPGEHIVSINRRHLNEVMITQAEKSPNVKFFFEHKVKN 132

Query: 601 SNLRKGFLSFQ-------------KTDTKEIVE--VNADLIIGADGCIFSCTQRNYETTT 735
            +  K  L  Q             K+  +E  E  V ADLI+  DG  +S  +R+  T  
Sbjct: 133 VDYDKKQLVVQCTSQPSKIPTFGNKSPPQEHAEFHVEADLILACDGA-YSAVRRSLMTIP 191

Query: 736 F*LQSEIY*TWIFGIMHTP**QWRIQMPPNYLHIWPXG 849
               S+ Y    +  ++            N  H+WP G
Sbjct: 192 RFDFSQEYIEHGYVELNIMANNNEFAFEENVFHLWPRG 229



 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = +2

Query: 692 GAFSAVRKEIMKQPLFDYNQKYIEHGYLELCIPPDSN 802
           GA+SAVR+ +M  P FD++Q+YIEHGY+EL I  ++N
Sbjct: 178 GAYSAVRRSLMTIPRFDFSQEYIEHGYVELNIMANNN 214


>Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical
           protein R07B7.4 protein.
          Length = 424

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 39/123 (31%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
 Frame = +1

Query: 331 GRSINLALSIRGRTALREVGLEDHMINNHGIPMKGRNIHRID--GSTYIIPYDSRTKQCI 504
           G+SINLAL +R  + ++ +GL++ +I + G+P++ +  H  D  G    +P        I
Sbjct: 4   GKSINLALGVRAMSTMKRIGLKEKVI-HIGVPIRDQIAHFGDTKGKLKRLPV-LNDDDFI 61

Query: 505 YSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTDTKEIVEVNADLIIG 684
            ++ R  L+ +L+ E+EKY NV+  FN K    +L+   L  Q +D   +  V+ DL + 
Sbjct: 62  LTINRQELSQILINEAEKYNNVKFHFNCKATKFDLKSESLIVQNSD--NLSTVDGDLFLA 119

Query: 685 ADG 693
            DG
Sbjct: 120 CDG 122



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 14/32 (43%), Positives = 25/32 (78%)
 Frame = +2

Query: 692 GAFSAVRKEIMKQPLFDYNQKYIEHGYLELCI 787
           GA S++R+ ++K P F+++QKY E GY++L +
Sbjct: 122 GAHSSIRRSLLKAPGFNFSQKYSEFGYIDLSV 153


>U80954-5|AAB38096.1|  822|Caenorhabditis elegans Hypothetical
           protein T07F8.1 protein.
          Length = 822

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 129 LFIIIFVKYYIQHSDGEFR-EWNVQETRCGCCRWRFG-GITRSIIFGEERT 275
           +FI+ FVKY  +H   +FR  +  +ET C   ++R   G  +S     ++T
Sbjct: 170 IFIVDFVKYVSKHRRFKFRTRFTTEETFCAVIKFRLSDGFLKSFKSFSQKT 220


>AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p450
           family protein 33C3 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +1

Query: 505 YSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTD 642
           +S+GR    G  L   E +  V  FFNH  I+ +  +GF S  K+D
Sbjct: 432 FSIGRRQCPGEGLARMEIFLFVANFFNHYQISPS-SEGFPSIDKSD 476


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,695,016
Number of Sequences: 27780
Number of extensions: 458268
Number of successful extensions: 1004
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)