Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L09
         (932 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   2.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    24   7.6  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 139 KRSTTTAWQSRWWCDARQQERS 204
           +++T   WQ  W  DA QQ+ S
Sbjct: 930 RQNTIDCWQEEWDADALQQDAS 951


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = -2

Query: 928 PGXPXIXGTEXPPXGXENPXPXPKXPGPXXXXXXETEKG 812
           PG P I G    P G E     P   GP      +  KG
Sbjct: 391 PGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQGPKG 429


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 151 WLTSSKALGLGIIICHPGC 95
           WL  +    +G ++C PGC
Sbjct: 445 WLQKATEHVIGCVLCSPGC 463


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,889
Number of Sequences: 2352
Number of extensions: 9078
Number of successful extensions: 40
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)