Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L08
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.57 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   7.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   7.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 808 PPWPPVLTSPVLIPDSWCFAIVHQKPSTPQMCHCT 704
           PP PP+     L PD +C    ++ P   Q C CT
Sbjct: 536 PPSPPLSQIHDLSPDQFCNG-DNRPPDCGQNCMCT 569


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +3

Query: 267 DNPPPPVEEPGQ-AMDKPPEPKPNLIDK 347
           +NPP P   P + +  KP  P+P  +++
Sbjct: 248 ENPPTPKPRPTKVSRRKPRPPRPTQVEE 275


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -1

Query: 213 KTQKIYI*INIYKPLMFFLYYLTEFMSI 130
           K  K+Y    +Y  LMF +Y +TE  S+
Sbjct: 26  KPTKLYQ--KLYPVLMFLIYTITEIYSV 51


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 435  TIATSNALCFDICDCHDDALNLHGYS 512
            T  T+N+L F +     D   +HGY+
Sbjct: 1405 TSTTTNSLTFKLKPHESDVEPIHGYT 1430


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 531 LLGSQCNCIHVN*EHRHDSHKCQN 460
           L+G   NC+ V  E  + SH CQN
Sbjct: 251 LIGLIKNCVIVIFELYYLSHVCQN 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,326
Number of Sequences: 336
Number of extensions: 4800
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)