Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L08
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 31 0.87
10_06_0036 - 9914606-9915561,9916287-9916368 31 1.1
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 25 1.4
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 31 1.5
06_01_0881 + 6754600-6754681,6754742-6755284,6755461-6755523,675... 30 2.0
07_03_1382 - 26170563-26170631,26171151-26171843 30 2.7
02_02_0414 + 9972157-9972257,9972925-9973003,9973657-9973755,997... 30 2.7
01_06_1437 - 37358912-37359226 30 2.7
07_03_0323 - 16773826-16774569,16774976-16775211,16775337-16775646 29 3.5
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 29 3.5
10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622 29 4.6
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 4.6
04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871 29 4.6
02_05_0496 - 29499959-29500653,29501039-29501093 29 4.6
08_01_0059 - 394001-394708 29 6.1
07_03_1160 - 24430240-24431268 29 6.1
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 6.1
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 29 6.1
01_05_0293 - 20532559-20532572,20532573-20532798,20532926-205339... 29 6.1
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 28 8.1
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869 28 8.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 8.1
09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116 28 8.1
08_02_1049 + 23944526-23945473 28 8.1
07_03_0187 + 14837290-14837680,14839698-14839723 28 8.1
01_06_0373 - 28841462-28842850 28 8.1
>06_03_1368 -
29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 258 TDQDNPPPPVEEPGQAMDKPPEPKP 332
TDQ + PPP PG A PPE P
Sbjct: 3 TDQPHLPPPAPPPGAAAADPPESTP 27
>10_06_0036 - 9914606-9915561,9916287-9916368
Length = 345
Score = 31.1 bits (67), Expect = 1.1
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 7/101 (6%)
Frame = +3
Query: 258 TDQDNPPPPVEEPGQAMDKPPEPKPNL-------IDKLVIIFAESTHSPRIHIAGIHESS 416
T +PPPP A + PPE P++ +V++ A +T P A E++
Sbjct: 167 TSVASPPPPGVPLSFAPNAPPEVVPSVPPAAAPPSTPVVVVPAPATSPPMSMPATPPEAA 226
Query: 417 TE*VVPTIATSNALCFDICDCHDDALNLHGYSCIGSPTVPL 539
+ P A A C + N G C+ PTVPL
Sbjct: 227 AGGMAPCSAPPTA-AMSPQPCSGEGGNGGGQWCVAKPTVPL 266
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +3
Query: 300 QAMDKPPEPKPNLIDKLVIIFAESTHSP 383
Q + +PP+PK + + + ++ AE+T P
Sbjct: 615 QGLLEPPKPKVKMSNLMKVLGAEATQDP 642
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 237 KVIMAEKTDQDNPPPPVEEPGQAMDKPPEP 326
KV M + T P P+E P + PP+P
Sbjct: 557 KVNMEKITIYVEHPEPLEPPAEPAPPPPQP 586
>07_03_1512 +
27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 559 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 708
E + QGS ++ Y+ + AR P+D+ T Q K L+ + E Y
Sbjct: 454 EFRALNQGSRSVTEYLHDFNRLARYAPEDIRTDEERQEKFLEGLNDELSY 503
>06_01_0881 +
6754600-6754681,6754742-6755284,6755461-6755523,
6755653-6755666
Length = 233
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Frame = -3
Query: 817 PEVPPWPPVLTS----------PVLIPDSWCFAIVHQKPSTPQMCHCTIPLQKWNP 680
PE+PP PP+L S PV +P+S A+ P TPQ C L P
Sbjct: 80 PELPPLPPLLPSVSITPGSSGAPVQVPNSSQSALAVAAPITPQPTECLSSLMALMP 135
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 273 PPPPVEEPGQAMDKPPEPKPNL 338
PPPP + G A + PP P P L
Sbjct: 186 PPPPPQPSGDANENPPPPPPPL 207
>02_02_0414 +
9972157-9972257,9972925-9973003,9973657-9973755,
9973848-9973913,9974225-9974376,9974503-9974584,
9974696-9974781,9974919-9975098,9975320-9975717,
9976192-9976790,9977141-9977239
Length = 646
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 225 GIENKVIMAEKTDQDNP-PPPVEEPGQAMDKPPEP 326
G+ + I+ DQ+ PPP E Q+MD PP+P
Sbjct: 404 GVSSNAIVPYYDDQNGGLPPPPWEIQQSMDNPPQP 438
>01_06_1437 - 37358912-37359226
Length = 104
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 279 PPVEEPGQAM-DKPPEPKPNLIDKLV 353
PP+ PG+ + D PP P P +D+L+
Sbjct: 44 PPLSPPGRTVADGPPPPPPRALDRLI 69
>07_03_0323 - 16773826-16774569,16774976-16775211,16775337-16775646
Length = 429
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 577 QGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 708
QGS + Y+ + + AR P+DV T Q K L+ + E Y
Sbjct: 342 QGSRTVTEYLHEFNRLARYAPEDVRTDEERQEKFLEGLNDELSY 385
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 249 AEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
AE+ ++ PPP EP + PEP+P
Sbjct: 310 AEEEEKPASPPPAPEPEPEQEPEPEPEP 337
>10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622
Length = 313
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 729 DGFWWTMAKHQLSGISTGLVRTGGQGGTSGLFRLR 833
DG++W + H G+ T L + G G+ G +R
Sbjct: 185 DGYFWLVRHHLDEGLETSLAQRGAADGSRGRLGVR 219
>10_05_0026 +
8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 559 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 708
E + QGS ++ Y+ + + AR P+DV Q K L+ + E Y
Sbjct: 351 EFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSY 400
>04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871
Length = 398
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 559 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELYN 711
E + QG+ + Y+ + + AR +P+DV T +Q K L + +EL N
Sbjct: 113 EFRALHQGNRTVTEYLHEFNRLARYEPEDVRTDAEKQEKFLAGL-DDELTN 162
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 225 GIENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKPN 335
G E++ A+ Q PPPP ++ A KPP+ N
Sbjct: 92 GPEHEHHQAQPQPQQEPPPPAQDAPPAEPKPPKRGKN 128
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 273 PPPPVEEPGQAMDKPPEPKPNLIDKLVIIF 362
PPPP P + PP P P+++ ++++F
Sbjct: 54 PPPPHISPPAPVPPPPSPPPHIV--IIVVF 81
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 267 DNPPPPVEEPGQAMDKPPEPKPN 335
D PP P + D+PP+P PN
Sbjct: 255 DQPPQPCPDGPPKPDQPPQPNPN 277
>04_01_0293 +
3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 559 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 708
E + QGS ++ Y+ + + AR P+DV Q K L+ + E Y
Sbjct: 152 EFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNGEERQEKFLEGLNDELSY 201
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 255 KTDQDNPPPPVEEPGQAMDKPPEPKPNLID 344
K+ NPP P+E+ PP+P P+ ++
Sbjct: 221 KSYTGNPPQPLEKDASPQPPPPKPAPSRLE 250
>01_05_0293 -
20532559-20532572,20532573-20532798,20532926-20533960,
20534670-20534996
Length = 533
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 270 NPPPPVEEPGQAMDKPPEPKPNLIDKL 350
+PP P + +PPEP P +D L
Sbjct: 87 DPPAPAAAGDAVLPRPPEPDPTQVDNL 113
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +3
Query: 219 MQGIENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKPN 335
MQG+ N++ + + +N PP+++P + + P P N
Sbjct: 773 MQGLPNQMRPPKHSFPENSRPPMQQPFEMAPRVPGPNQN 811
>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
Length = 526
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 273 PPPPVEEPGQAMDKPPEPKPNLI 341
PPPP +EP PP P P I
Sbjct: 14 PPPPPQEPAPLSPPPPLPTPKPI 36
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -3
Query: 808 PPWPPVLTSPVLIPDSWCFAIVHQKPSTPQMCHCTIPLQKWNPKPSPVL 662
PP PP P L ++ + P P + +C +P P P P+L
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPIL 612
>09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116
Length = 886
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 252 EKTDQDNP---PPPVEEPGQAMDKPPEPKPNLIDKLVII 359
E+ + NP PPP++ A D+PP P P + +++
Sbjct: 14 EEHETPNPSLTPPPMQLAALASDEPPPPPPEQSPRRIVV 52
>08_02_1049 + 23944526-23945473
Length = 315
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 222 QGIENKVIMAEKTDQDNPPPPVEEPG 299
+ + KV MA+K ++ PPP PG
Sbjct: 213 EAFQAKVAMADKVKEEEPPPVATRPG 238
>07_03_0187 + 14837290-14837680,14839698-14839723
Length = 138
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 642 RCCYHTYRTGEGFGFHFWRGIVQW 713
RCC HT TG G H + ++ W
Sbjct: 112 RCCLHTNNTGMGGTHHHQQEVLAW 135
>01_06_0373 - 28841462-28842850
Length = 462
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 279 PPVEEPGQAMDKPPEP 326
PP ++P + DKPPEP
Sbjct: 292 PPSDDPAKKFDKPPEP 307
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,661,189
Number of Sequences: 37544
Number of extensions: 533858
Number of successful extensions: 2815
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2724
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -