Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L08
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 32 0.44
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 32 0.44
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 31 1.4
AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical ... 30 2.4
AF003130-18|AAO38640.1| 441|Caenorhabditis elegans Prion-like-(... 29 3.1
AF003130-17|AAB54127.1| 470|Caenorhabditis elegans Prion-like-(... 29 3.1
AF003130-16|AAK68879.1| 457|Caenorhabditis elegans Prion-like-(... 29 3.1
AF003130-15|AAM45365.1| 465|Caenorhabditis elegans Prion-like-(... 29 3.1
AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical... 29 5.5
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 5.5
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical p... 28 7.2
Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical p... 28 7.2
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 28 7.2
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 28 7.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.2
AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical ... 28 9.5
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 28 9.5
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 28 9.5
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 219 MQGIENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
++G+E K + A++ D P P ++ PP PKP
Sbjct: 374 LEGLEVKALEAQEASDDRPSAPTPIRDSSLPPPPPPKP 411
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 219 MQGIENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
++G+E K + A++ D P P ++ PP PKP
Sbjct: 374 LEGLEVKALEAQEASDDRPSAPTPIRDSSLPPPPPPKP 411
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/78 (21%), Positives = 38/78 (48%)
Frame = +1
Query: 361 LPNRHIALXFTLPAFMKAPPNELYRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFRL 540
+P +++A+ + L ++ PP+ + R + A+ F V T++LIY + +
Sbjct: 148 VPEQNMAMNYVLQNYLYLPPDLVKRSFIFAIEFKWVVFPVATVVLIYAAELNVVVALLSR 207
Query: 541 NMTRDYELARIGQGSAAL 594
NM ++A + +A +
Sbjct: 208 NMKNTMKMATYSKQTAMM 225
>AL022271-1|CAA18349.1| 919|Caenorhabditis elegans Hypothetical
protein F32F2.1 protein.
Length = 919
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -3
Query: 832 RRRNSPE-VPPWPPVLTSPVLIPDSWCFAIVHQKPST 725
RR++S + + P P ++T PVL+ + C A+ +++ ST
Sbjct: 93 RRKSSKKLIEPLPMIITPPVLMARTQCCAVCYKEKST 129
>AF003130-18|AAO38640.1| 441|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform d protein.
Length = 441
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 643 DVVTTPTEQVKVLDSIFGEELYNGTFVEWMASGGRWQSTSYLESARGWSGLVARAAPQDY 822
D+++ + LDS FG T+ +W +SG S + A S LV A D+
Sbjct: 312 DLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATTSSLLVTGQAKYDF 371
>AF003130-17|AAB54127.1| 470|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform a protein.
Length = 470
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 643 DVVTTPTEQVKVLDSIFGEELYNGTFVEWMASGGRWQSTSYLESARGWSGLVARAAPQDY 822
D+++ + LDS FG T+ +W +SG S + A S LV A D+
Sbjct: 341 DLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATTSSLLVTGQAKYDF 400
>AF003130-16|AAK68879.1| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform b protein.
Length = 457
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 643 DVVTTPTEQVKVLDSIFGEELYNGTFVEWMASGGRWQSTSYLESARGWSGLVARAAPQDY 822
D+++ + LDS FG T+ +W +SG S + A S LV A D+
Sbjct: 328 DLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATTSSLLVTGQAKYDF 387
>AF003130-15|AAM45365.1| 465|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 44,
isoform c protein.
Length = 465
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 643 DVVTTPTEQVKVLDSIFGEELYNGTFVEWMASGGRWQSTSYLESARGWSGLVARAAPQDY 822
D+++ + LDS FG T+ +W +SG S + A S LV A D+
Sbjct: 336 DLISQENKLRNYLDSHFGTSFNGATYDQWSSSGSDTDSEASTSQATTSSLLVTGQAKYDF 395
>AL132949-17|CAB70108.2| 338|Caenorhabditis elegans Hypothetical
protein Y53F4B.19 protein.
Length = 338
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 252 EKTDQDNPPPPVEEPGQAMDKPPEPKPNLIDKLVIIF 362
EK ++ NPP P++ D P P P ID ++F
Sbjct: 31 EKYERKNPPIPLDNEYNYQDVTPSPFPFHIDAPSLVF 67
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 255 KTDQDNPPPPVEEPGQAMDKPPEPKPNLIDKLVIIFAESTHSPR 386
KT PP P P A PP+P N I ST PR
Sbjct: 256 KTSPTKPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQPPR 299
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 228 IENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
+ KV MA +PPPP P + + P P P
Sbjct: 382 VPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVP 416
>Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical
protein F46B6.3b protein.
Length = 368
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 228 IENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
++ K E+ +QD P P ++ + + KPP P P
Sbjct: 262 LDEKKKKHEEREQDGPRVPRDKKKERLAKPPRPSP 296
>Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical
protein F46B6.3a protein.
Length = 329
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 228 IENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
++ K E+ +QD P P ++ + + KPP P P
Sbjct: 262 LDEKKKKHEEREQDGPRVPRDKKKERLAKPPRPSP 296
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 228 IENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
+ KV MA +PPPP P + + P P P
Sbjct: 382 VPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVP 416
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 228 IENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKP 332
+ KV MA +PPPP P + + P P P
Sbjct: 382 VPQKVSMAPSQSSSSPPPPEPVPTPKVAQTPAPVP 416
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 273 PPPPVEEPGQAMDKPPEPKPNLIDKLVIIFAESTHS 380
PPPP+ P + PP P P+ K + A + H+
Sbjct: 1378 PPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNGHT 1413
>AF099915-1|AAC68771.1| 460|Caenorhabditis elegans Hypothetical
protein E02H9.6 protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +3
Query: 222 QGIENKVIMAEKTDQDNPPP-----PVEEPGQAMDKPPEPKPNLIDKLVIIFAESTHSPR 386
+G N + T + NP P P EP P+P PNL+ V+ EST S +
Sbjct: 178 KGSRNSKCKPKYTPKTNPKPERKPKPKPEPKPKPYPKPKPNPNLV---VLSHFESTKSLK 234
Query: 387 IH 392
H
Sbjct: 235 FH 236
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 225 GIENKVIMAEKTDQDNPPPPVEEP 296
G E +V +AE + N PPPVE P
Sbjct: 9 GAEAEVKVAEDVPEKNVPPPVEPP 32
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 225 GIENKVIMAEKTDQDNPPPPVEEP 296
G E +V +AE + N PPPVE P
Sbjct: 9 GAEAEVKVAEDVPEKNVPPPVEPP 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,801,196
Number of Sequences: 27780
Number of extensions: 433345
Number of successful extensions: 1907
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1851
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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