Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_L06
         (941 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   4.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   4.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
 Frame = -3

Query: 693 QKXFXPGXP--PXXXXXPXPPPXGXKXPPPPP 604
           Q  F  G P  P     P PPP     PPP P
Sbjct: 566 QLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP 597



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -1

Query: 818 PFFXPXXPPXXXFXFPXGGP--PXXKPPPXPP 729
           PFF P  P      FP G P  P  +PPP PP
Sbjct: 558 PFF-PLNPAQ--LRFPAGFPNLPNAQPPPAPP 586


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +1

Query: 667  GGTRXKXFLSXXXXXGXQXXXGGXGGGFXXGGPPXGXK 780
            GG   K ++S     G +   GG  GG    G P   K
Sbjct: 901  GGRGRKDYISDSDASGGEVGGGGGSGGEEGSGAPKERK 938


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
 Frame = -3

Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPP----PXGXKXPP 613
           P    L    G  GQK   P  PP     P PP    P G K  P
Sbjct: 689 PGMSGLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLP 733


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.145    0.472 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,834
Number of Sequences: 2352
Number of extensions: 5216
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)