Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L06
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.032
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.032
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.032
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.8
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 2.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.8
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 2.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.8
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.4
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 6.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 8.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 8.4
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 28 8.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.032
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXPPPPP 604
PP L P G G PP P PPP PPPPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXP----PPPP 604
PP L P G G PP P PPP G P PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKX--PPPPP 604
PP L P G PG P P PPP G K PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPP--PPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.032
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXPPPPP 604
PP L P G G PP P PPP PPPPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXP----PPPP 604
PP L P G G PP P PPP G P PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKX--PPPPP 604
PP L P G PG P P PPP G K PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPP--PPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.032
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXPPPPP 604
PP L P G G PP P PPP PPPPP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXP----PPPP 604
PP L P G G PP P PPP G P PPPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 32.3 bits (70), Expect = 0.52
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKX--PPPPP 604
PP L P G PG P P PPP G K PPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPP--PPPPPGGFKGGPPPPPP 372
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.90
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPPXGXKXPPPPP 604
P PP P PPP PPPPP
Sbjct: 95 PPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXPPPPP 604
PP L P F P P P P P G PPPPP
Sbjct: 47 PPSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGI--PPPPP 88
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = -3
Query: 732 PXXXLXPXXGXXGQKXFXPGXPPXXXXXPXPPPXGXKXPPPPP 604
P + P G G P P P PPP PPPPP
Sbjct: 70 PNGFIPPPPGPGG---IPPPPPMFAGGIPPPPPMMGGIPPPPP 109
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXPPPPP 605
PP F PPP PPPPP
Sbjct: 777 PPPFFALPVPPPPPVPPPPPPP 798
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PPP PPPPP
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PPP PPPPP
Sbjct: 59 PPMCPPPPPPPPPPMCPPPPPP 80
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +2
Query: 605 GGGGGXFXPXGGGXGXXXKXGGXPGKKXFC-PXXPXXGXKXXXGG 736
GGGGG GGG G GG G C P P G + G
Sbjct: 88 GGGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPG 132
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPPXGXKXPPPPP 604
P P P PPP G PPPPP
Sbjct: 780 PLPPRLQGGIPPPPPLGIIPPPPPP 804
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PPP PPPPP
Sbjct: 89 PPHGLGPPPPPPHYYTQPPPPP 110
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = -2
Query: 685 FFXGXPPXFX-GXXXPPPXGXKXPPPPP 605
F G PP PPP G PPPPP
Sbjct: 73 FMGGPPPHHQYHLQYPPPHGLGPPPPPP 100
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXPPPPP 605
PP G PPP PPPPP
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PP G PPPPP
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPP 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXP-GXPPXXXXXPXPPPXGXKXPPPPP 604
PP P G P G PP PPP PPPPP
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 675 GXPPXXXXXPXPPPXGXKXPPPPP 604
G PP PPP PPPPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXPPPPP 605
PP G PPP PPPPP
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PP G PPPPP
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPP 324
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXP-GXPPXXXXXPXPPPXGXKXPPPPP 604
PP P G P G PP PPP PPPPP
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 675 GXPPXXXXXPXPPPXGXKXPPPPP 604
G PP PPP PPPPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXPPPPP 605
PP G PPP PPPPP
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PP G PPPPP
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPP 309
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = -3
Query: 735 PPXXXLXPXXGXXGQKXFXP-GXPPXXXXXPXPPPXGXKXPPPPP 604
PP P G P G PP PPP PPPPP
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 675 GXPPXXXXXPXPPPXGXKXPPPPP 604
G PP PPP PPPPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPP 282
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPPXGXKXPPPPP 604
P P P PPP G PPPPP
Sbjct: 780 PLPPRLQGGIPPPPPLGIIPPPPPP 804
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 33 PPPPPKGTGTPPPPP 47
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 64 PPPPPKGTGTPPPPP 78
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 96 PPPPPKGTGTPPPPP 110
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 127 PPPPPKGTGSPPPPP 141
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 158 PPPPPKGTGSPPPPP 172
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 189 PPPPPKGTGTPPPPP 203
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP G PPPPP
Sbjct: 251 PPPPPKGTGSPPPPP 265
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 669 PPXXXXXPXPPPXGXKXPPPPP 604
PP P PPP PPPPP
Sbjct: 66 PPPPICPPPPPPPMPCPPPPPP 87
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 648 PXPPPXGXKXPPPPP 604
P PPP K PPPPP
Sbjct: 88 PPPPPPTLKAPPPPP 102
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 605 GGGGGXFXPXGGGXGXXXKXGGXPGKKXFC---PXXPXXGXKXXXGG 736
GGGGG GGG G GG G C P P G GG
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 69
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXP---PPPP 605
PP G PPP G + P PPPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPP---XGXKXPPPPP 604
P PP P PPP G PPPPP
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPPXGXKXPPPPP 604
P PP P PP PPPPP
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPP 322
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 605 GGGGGXFXPXGGGXGXXXKXGG 670
GGGGG F GGG G GG
Sbjct: 490 GGGGGGFGGGGGGFGSGSPFGG 511
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXP---PPPP 605
PP G PPP G + P PPPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPP---XGXKXPPPPP 604
P PP P PPP G PPPPP
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 678 PGXPPXXXXXPXPPPXGXKXPPPPP 604
P PP P PP PPPPP
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPP 332
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 806 PXXPPXXXFXFPXGGPPXXKPPPXPP 729
P PP P PP PPP PP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 605 GGGGGXFXPXGGGXGXXXKXGG 670
GGGGG P GGG G GG
Sbjct: 320 GGGGGGDFPAGGGGGGYSTGGG 341
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 605 GGGGGXFXPXGGGXGXXXKXGG 670
GGGGG F GGG G GG
Sbjct: 321 GGGGGDFPAGGGGGGYSTGGGG 342
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXPPPP 608
PP F G PPP G PPPP
Sbjct: 290 PPPF-GFFPPPPRGHFPPPPP 309
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 670 PPXFXGXXXPPPXGXKXPPPP 608
PP F G PPP G PPPP
Sbjct: 290 PPPF-GFFPPPPRGHFPPPPP 309
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 605 GGGGGXFXPXGGGXGXXXKXGGXPGKKXFCPXXPXXGXKXXXGG 736
GG GG GGG G GG CP G GG
Sbjct: 53 GGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGG 96
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.145 0.472
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,766,438
Number of Sequences: 27780
Number of extensions: 175770
Number of successful extensions: 2286
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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