Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_L05
(912 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 194 3e-48
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 183 5e-45
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 155 1e-36
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 155 1e-36
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 148 2e-34
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 147 3e-34
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 143 5e-33
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 142 1e-32
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 132 1e-29
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 128 1e-28
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 127 3e-28
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 125 2e-27
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 98 2e-19
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 95 2e-18
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 69 2e-10
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 67 7e-10
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 9e-06
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 53 1e-05
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 49 1e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 44 0.007
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.15
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.20
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 38 0.47
UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.62
UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062; ... 36 1.9
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 2.5
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 35 3.3
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 34 5.8
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 5.8
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 7.7
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 7.7
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 194 bits (473), Expect = 3e-48
Identities = 96/151 (63%), Positives = 117/151 (77%), Gaps = 2/151 (1%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RTN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVGT+T+DVR+
Sbjct: 34 FLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQ 93
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE RHFG
Sbjct: 94 EVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFG 153
Query: 539 PAPGAPRSHTKPYVRTKGH--EKARPSRRAN 625
APG P SHTKPYVR+KG E+AR RRA+
Sbjct: 154 KAPGTPHSHTKPYVRSKGRKFERAR-GRRAS 183
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 183 bits (446), Expect = 5e-45
Identities = 90/150 (60%), Positives = 116/150 (77%), Gaps = 2/150 (1%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+L RT++ FN ++L+RLFMS++NRPP+S+SRL ++M+ +EG I VVVG VT+D+R+Y
Sbjct: 32 FLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQG--KEGKIGVVVGAVTDDIRVY 89
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
+P + V AL TE ARARI AGGE LTFDQLALR P TVL++G +NAREAV+HFG
Sbjct: 90 DVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFG 148
Query: 539 PAPGAPRSHTKPYVRTKGH--EKARPSRRA 622
PAPG P SHTKPYVR+KG EKAR R++
Sbjct: 149 PAPGVPHSHTKPYVRSKGRKFEKARGRRKS 178
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 155 bits (377), Expect = 1e-36
Identities = 78/150 (52%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RT+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T+D RL+
Sbjct: 91 FLARRTDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLF 148
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
M V AL TE AR RI+ AGGE LTFDQLALR PTGK +L++G AR A +HFG
Sbjct: 149 SCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFG 208
Query: 539 PAPGAPRSHTKPYVRTKGH--EKARPSRRA 622
APG P+S +PYVR+KG EKAR R++
Sbjct: 209 SAPGRPKSKARPYVRSKGRKFEKARGRRKS 238
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 155 bits (377), Expect = 1e-36
Identities = 77/148 (52%), Positives = 108/148 (72%), Gaps = 5/148 (3%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RT+A FN++VL+ LF+S+INRPP+SVSR+AR +K+ VVVGTVT+D R++
Sbjct: 35 FLARRTDAPFNKVVLKALFLSKINRPPVSVSRIARALKQEGAANKTVVVVGTVTDDARIF 94
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
+ PK TVAAL T ARA+I+ AGGE +T DQLA+RAP G+ T++++G RN+REAVRHFG
Sbjct: 95 EFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFG 154
Query: 539 PAP---GAPR--SHTKPYVRTKGHEKAR 607
P APR S + + R +G +++
Sbjct: 155 MGPHKGKAPRILSTGRKFERARGRRRSK 182
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 148 bits (359), Expect = 2e-34
Identities = 79/152 (51%), Positives = 105/152 (69%), Gaps = 6/152 (3%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVT 340
+LA RT++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V
Sbjct: 35 FLAKRTSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVL 94
Query: 341 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 520
+DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G+++ RE
Sbjct: 95 DDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRE 154
Query: 521 AVRHFGPAPGAPRSHTKPYVRTKGHEKARPSR 616
+VRHFG A G P SH+KPY +G E R R
Sbjct: 155 SVRHFG-ASGVPGSHSKPYATNRGKETKRGRR 185
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 147 bits (357), Expect = 3e-34
Identities = 78/150 (52%), Positives = 106/150 (70%), Gaps = 2/150 (1%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+L+ RT+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+
Sbjct: 35 FLSRRTDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMD 92
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
+PK++V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 93 VVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF- 151
Query: 539 PAPGAPRSHTKPYVRTKGH--EKARPSRRA 622
+ + KPYVR+KG EKAR R +
Sbjct: 152 --RNEVKGNPKPYVRSKGRKFEKARGRRHS 179
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 143 bits (347), Expect = 5e-33
Identities = 68/117 (58%), Positives = 92/117 (78%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RTNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++
Sbjct: 4 FLARRTNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIH 63
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 529
K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 64 KLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 142 bits (344), Expect = 1e-32
Identities = 74/134 (55%), Positives = 93/134 (69%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RT+++FN VLRRL +R R PISVSRL + + + VVVGTVT+D RL
Sbjct: 250 FLARRTDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLL 309
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
+PK+ V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G + REA++HFG
Sbjct: 310 TVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFG 368
Query: 539 PAPGAPRSHTKPYV 580
A G P SH KPYV
Sbjct: 369 RAAGLPGSHAKPYV 382
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 132 bits (319), Expect = 1e-29
Identities = 73/134 (54%), Positives = 90/134 (67%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RT++ FN VLRRL +R R PISVSRL + + + VVVGTVT+DVRL
Sbjct: 330 FLARRTDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLL 389
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
+PK+ V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R RE ++HFG
Sbjct: 390 TVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFG 444
Query: 539 PAPGAPRSHTKPYV 580
A G P SH KPYV
Sbjct: 445 RAAGLPGSHAKPYV 458
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 128 bits (310), Expect = 1e-28
Identities = 67/120 (55%), Positives = 86/120 (71%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RT +KF + +L RL +SR+NRP +S S+LA MKK E AV V TVT D R Y
Sbjct: 34 FLARRTQSKFAKTILHRLCLSRVNRPIVSTSKLACLMKKHPEE--TAVCVNTVTYDSR-Y 90
Query: 359 KIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 538
+PKM V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL++G+RN REA++HFG
Sbjct: 91 PVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 127 bits (307), Expect = 3e-28
Identities = 62/117 (52%), Positives = 81/117 (69%)
Frame = +2
Query: 248 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 427
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 428 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 598
GG+ LTFDQLAL +P TVL+ G R RE HF A G P SHTKPYVR+KG +
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 125 bits (301), Expect = 2e-27
Identities = 67/138 (48%), Positives = 86/138 (62%)
Frame = +2
Query: 194 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 373
T F +++ +RL +S+ NRP +SVSRLA M K RE IAVV TVTND RL IP+M
Sbjct: 40 TGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRM 97
Query: 374 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 553
T+ AL + AR+RI AGG ++FD+L PTG VL+QG+R+ R + FG +PG
Sbjct: 98 TICALKFSATARSRIEKAGGRCMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKFG-SPGR 156
Query: 554 PRSHTKPYVRTKGHEKAR 607
P SH KP KG AR
Sbjct: 157 PNSHVKPKGEHKGRRGAR 174
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/113 (43%), Positives = 71/113 (62%)
Frame = +2
Query: 254 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 433
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 434 EILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 592
+IL+FDQLA+ +P +G + + RH G G+P S+ KPYV + G
Sbjct: 107 KILSFDQLAMTSP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 95.5 bits (227), Expect = 2e-18
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +2
Query: 341 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 520
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 521 AVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 622
AV+HF + + KPYVR+KG EKAR R +
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRKFEKARGRRHS 217
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+LA RT+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L
Sbjct: 35 FLARRTDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLG 92
Query: 359 KIPKMTVAALHVT 397
IP TV + VT
Sbjct: 93 MIPSTTVTLVLVT 105
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/80 (40%), Positives = 54/80 (67%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+L +T +KFN + L+R FMS++N+ P+ +SRL R M ++G I VV+G+VT+D+R+Y
Sbjct: 35 FLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVY 92
Query: 359 KIPKMTVAALHVTEKARARI 418
++ + V L T++ R I
Sbjct: 93 EVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 68.9 bits (161), Expect = 2e-10
Identities = 32/80 (40%), Positives = 54/80 (67%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLY 358
+L +T +KFN + L+R FMS++N+ P+ +SRL R M ++G I VV+G+VT+D+R+Y
Sbjct: 35 FLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVY 92
Query: 359 KIPKMTVAALHVTEKARARI 418
++ + V L T++ R I
Sbjct: 93 EVLYLKVTILRFTKRVREGI 112
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 66.9 bits (156), Expect = 7e-10
Identities = 40/130 (30%), Positives = 66/130 (50%)
Frame = +2
Query: 218 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 397
+ +RL MS+ +R P+ +S++ + + + +AVVV V +D + IP + V AL +
Sbjct: 52 ISKRLKMSKSDRQPVKISKIVSEIGESKDK--VAVVVAKVLDDDEVMVIPAVKVVALQWS 109
Query: 398 EKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPY 577
+ + +I GG I T DQL P LV + +R + + +GPAPG S T P
Sbjct: 110 KGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFSRRSAKFWGPAPGEKGSTTYPR 169
Query: 578 VRTKGHEKAR 607
K H + +
Sbjct: 170 ANQKCHNREK 179
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 53.2 bits (122), Expect = 9e-06
Identities = 28/102 (27%), Positives = 57/102 (55%)
Frame = +2
Query: 203 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 382
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 383 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 508
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 52.8 bits (121), Expect = 1e-05
Identities = 21/33 (63%), Positives = 30/33 (90%)
Frame = +2
Query: 179 YLAXRTNAKFNQIVLRRLFMSRINRPPISVSRL 277
+LA RTN+ FN++VL+RLFMSR NRPP+++SR+
Sbjct: 143 FLARRTNSSFNKVVLKRLFMSRTNRPPLALSRM 175
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 49.2 bits (112), Expect = 1e-04
Identities = 38/144 (26%), Positives = 69/144 (47%)
Frame = -3
Query: 622 STTTGPCFFMSLGANIGFSVRARCSWSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKS 443
ST+T F +S G +S+ + +V+ + S T +L S+ SQLI+S
Sbjct: 28 STSTSSSFELSTGRLDSWSLTL--VRTETEVSSSFSGSSWTSDDQGVLTLWSSNSQLIQS 85
Query: 442 KNFSSSSQNACTSFFGNMKSSHRHLRYLVQSHVICDCPHYHGNQTLTSWLLHVARQTRHR 263
F++S Q+ +SS+ L S VI + + +++LL +R + +R
Sbjct: 86 DGFTTSLQDLSLGTSSESQSSNGGLWEFKDSVVIGNSTNNDNGLLSSTFLLQGSRDSGNR 145
Query: 262 DWWPVDTAHKEPA*NDLIEFGICT 191
+WW VD ++ ++L+E+ I T
Sbjct: 146 NWWSVDLGQEQRLQDNLVEWSIST 169
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 43.6 bits (98), Expect = 0.007
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = +2
Query: 185 AXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKI 364
A +A ++V + R R ++V +L R K EG + VV G + +L K
Sbjct: 24 ARANSASIWRVVAEFVEKPRRQRVIVNVGKLNRVAK----EGDVVVVPGKLLAGGQLNK- 78
Query: 365 PKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 496
K+ VAA+ ++ KA +++ AGGE+LT +L + P G +V
Sbjct: 79 -KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRGSGVRIV 121
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +2
Query: 251 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 430
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 431 GEILTFDQLALRAPTGKKTVLV 496
G + F +L PTGK VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.20
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -1
Query: 435 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 256
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 255 GRLI 244
G LI
Sbjct: 63 GSLI 66
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 37.5 bits (83), Expect = 0.47
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 209 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 385
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 386 LHVTEKARARILAAGGEILTFDQLALRAPTG 478
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q3JMF5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 740
Score = 37.1 bits (82), Expect = 0.62
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2
Query: 458 ALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKARPSRRAN 625
A RAP G L+ R AR + R P P PR+ T+P+ + +AR SRR +
Sbjct: 668 ATRAPFGACAALIARARGARRSRRARAP-PRTPRTATRPHAARRRGRRARRSRRGS 722
>UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062;
n=2; Homo sapiens|Rep: CDNA FLJ46261 fis, clone
TESTI4025062 - Homo sapiens (Human)
Length = 280
Score = 35.5 bits (78), Expect = 1.9
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Frame = +1
Query: 316 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 480
CR SG S R CS +S T CW + F S+G+S +
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89
Query: 481 EDSTGTRSAKC----S*GSASLWPCSRSTALSH*TLCSHQGT 594
S+GT S C S S++ W C S S +C GT
Sbjct: 90 CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 2.5
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 275 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 388
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 34.7 bits (76), Expect = 3.3
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 185 AXRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYK 361
A NA + V RL R R ++V +L ++ +E +V G V D + +
Sbjct: 24 ACEYNAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ 83
Query: 362 IPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 499
+ VAA + AR +I AAGGE LT +L P G +++
Sbjct: 84 --PLRVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 33.9 bits (74), Expect = 5.8
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 616 TTGPCFFMSLGANIGFSVRARCS-WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSK 440
T P +++ L FS+ A W K T +I+LT Q+CLL R+T +
Sbjct: 49 TYWPIWYIELVFATLFSLNAVFDFWKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTS 108
Query: 439 NFSSSSQ 419
NF+ SS+
Sbjct: 109 NFARSSK 115
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 5.8
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +2
Query: 194 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 373
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 374 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 481
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 7.7
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -3
Query: 541 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 362
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 361 LVQ 353
L++
Sbjct: 257 LME 259
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 7.7
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = +2
Query: 197 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 376
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 377 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 499
VAA ++KA+ +I +AGGE ++ D + P G +++
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,542,529
Number of Sequences: 1657284
Number of extensions: 13380033
Number of successful extensions: 36300
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 34906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36249
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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