Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_K23
(835 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 36 0.009
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 33 0.066
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.81
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 28 1.4
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 28 1.9
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch... 27 2.5
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 27 4.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 4.3
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 26 7.6
SPBPB2B2.07c |||S. pombe specific DUF999 protein family 7|Schizo... 26 7.6
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 35.5 bits (78), Expect = 0.009
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Frame = +3
Query: 297 KTIATDSLIKKYYEKK----DLLDQTEKSLLTSKEECK---QICIDYRKSMETC--SKLE 449
KT+ D+L K Y EK+ +LLD +K L + E CK Q CI+ R ++ T S +E
Sbjct: 169 KTVV-DALYKSYLEKQSDYSELLDNYKKQLNKASESCKGNYQACIESRSTLITSLESLIE 227
Query: 450 NDMQILQNVNKGLES 494
++L + L+S
Sbjct: 228 EQKKLLSEEEESLKS 242
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 32.7 bits (71), Expect = 0.066
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 315 SLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLES 494
S +K E + LL Q E + K +++C+DY K + + + LQ N+ L+S
Sbjct: 671 SYYQKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQS 730
Query: 495 KCFQAENQ 518
+ Q +
Sbjct: 731 QILQISEE 738
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.1 bits (62), Expect = 0.81
Identities = 18/74 (24%), Positives = 35/74 (47%)
Frame = +3
Query: 348 LLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAENQYAA 527
L+ + K + E + Y+KS+E C K ++ + L+ + K KC + ++
Sbjct: 446 LVKEQFKRFAHMQREIVAMSEQYQKSLEDCQKAKSRYEQLETLFK---DKCTENKHYEQE 502
Query: 528 ATSLTHQLQMLVKE 569
L Q+Q+L+ E
Sbjct: 503 TKDLARQVQVLLHE 516
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 267 QRKAILIVKKKTIATDSLIKKYYEKK-----DLLDQTEKSLLTSKEECKQICIDYRKSME 431
Q+ I +V +K + L K+ ++ D+L+ KSLL KQ+ D ++ +
Sbjct: 395 QKTKIAVVVRKIFSLAGLPKENEDEVKSICGDILENRWKSLLQEISSQKQLSTDASQTQD 454
Query: 432 TCSKLENDMQILQNVNKGLESK 497
EN+ +I ++++G ESK
Sbjct: 455 ASIANENETEI-ASLDEGSESK 475
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/89 (22%), Positives = 44/89 (49%)
Frame = +3
Query: 252 NKFEKQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSME 431
N + + K I +K +IA +S+ + + +DL +TEK +++ K + + E
Sbjct: 295 NLKQAENKTISYEEKLSIAQNSINEIQTQNRDLKLETEK----LQDQIKALLERNQSLQE 350
Query: 432 TCSKLENDMQILQNVNKGLESKCFQAENQ 518
++ND + L+ +N E++ +A +
Sbjct: 351 ALETVKNDEKNLREMNANYETEMKEARQK 379
>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 891
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 324 KKYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLEND 455
+KY E LL + +K L KE C + +D K + S+ + D
Sbjct: 18 QKYNEATTLLSKLKKLLGNFKENCTSVVVDGHKKPRSESRKKYD 61
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 26.6 bits (56), Expect = 4.3
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Frame = +3
Query: 156 KPFLKMASTFNESMF-DFDLNFLHPTTPSDGQINK-FEKQRKAILIVKKKTIATDSLIKK 329
KP+L+ AST E F + + P +I++ F + +++L+ + T +L++
Sbjct: 1043 KPYLRSASTIEEQRFLYYVVAIFRQVLPFQKEISESFLRSLESVLLQRLTKAGTATLMEI 1102
Query: 330 YYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQ 461
L + L E K+I + KS+E EN+ Q
Sbjct: 1103 VPCLCSLFTR-----LNDYERLKKIVVSCLKSLEEARHSENNFQ 1141
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/98 (21%), Positives = 41/98 (41%)
Frame = +3
Query: 261 EKQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCS 440
E R + L K D+L K+ + + SL +K + + KS E
Sbjct: 703 EALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDVK 762
Query: 441 KLENDMQILQNVNKGLESKCFQAENQYAAATSLTHQLQ 554
+L +++ L +K ++ N Y + ++L H+L+
Sbjct: 763 RLTANVETLTQDSKAMKQSFTSLVNSYQSISNLYHELR 800
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 282 LIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEEC--KQICID 413
LI+ + +I KYY+K +L +T + EEC + C+D
Sbjct: 79 LIIPTREAKNIGIIDKYYKKNFILPKTLIRFSLTVEECTNPEYCMD 124
>SPBPB2B2.07c |||S. pombe specific DUF999 protein family
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 165
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -1
Query: 409 IHICLHSSFDVRRLFSVWSNRSFFS*YFFIRE-----SVAIVFFLTIKMAFLC 266
I + +F+V+ S+W N SF + F E ++ I F+ + + +C
Sbjct: 108 IVFAIDKNFEVKDFLSIWINESFINENRFYSEIWGPIAIYICLFILLLLGLIC 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,442,728
Number of Sequences: 5004
Number of extensions: 43293
Number of successful extensions: 173
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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