Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP09_F_K23
         (835 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606...    30   2.0  
03_02_0851 - 11778658-11778747,11778826-11778884,11779026-117790...    30   2.6  
08_01_1039 + 10548266-10548619,10548734-10549213,10549408-105495...    29   6.0  
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964...    29   6.0  
05_01_0537 + 4640251-4640260,4640445-4640918,4641272-4641375           28   8.0  
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324...    28   8.0  
03_01_0269 + 2080338-2080508,2081086-2081335,2081432-2082648,208...    28   8.0  

>01_06_1713 -
           39359558-39359590,39360000-39360074,39360437-39360662,
           39360792-39360880,39360960-39361053,39361134-39361318,
           39361415-39361582,39361682-39361822,39362327-39362545,
           39362628-39362744,39363154-39363248,39363662-39363743,
           39363864-39363926,39364157-39364216,39364312-39364476,
           39364574-39364759,39364890-39365180,39365262-39365405,
           39365492-39366172,39367045-39367362
          Length = 1143

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +3

Query: 327 KYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKG 485
           ++++  +L+ + E+ L  SK+E K     Y KS+ T S+LE  ++   +  +G
Sbjct: 731 EHHKLGELVKKLEQELQESKQELKAKQAQYEKSVSTVSELEKTIKTYGSEREG 783


>03_02_0851 -
           11778658-11778747,11778826-11778884,11779026-11779090,
           11779223-11779359,11779616-11779668,11779955-11779980,
           11780540-11780595
          Length = 161

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = +3

Query: 327 KYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQ----ILQNVNKGLES 494
           ++  +KDLL+  E+S++  K   +Q+  D + +++  +  E+D+Q     L++  K + S
Sbjct: 40  RFKTEKDLLNDAEQSMMEYKTSIEQLKKDSKYTLDKIAVGESDLQRGQTDLRSTGKQIRS 99

Query: 495 KCFQAENQYAAATSLTHQLQMLVKEQ 572
                    + AT L  +L+ +   Q
Sbjct: 100 LIGSIYKAESTATGLMDRLRTIPTRQ 125


>08_01_1039 +
           10548266-10548619,10548734-10549213,10549408-10549510,
           10549550-10550175
          Length = 520

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 24/84 (28%), Positives = 35/84 (41%)
 Frame = +3

Query: 312 DSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLE 491
           D L+K+  +    L  T K+L  S   C ++C +   S   CS+   +   + N N G  
Sbjct: 205 DLLMKRLDDHDKRLQGTIKAL-DSHVTC-EVCSNTGHSRNDCSETREEAIYMGNNNNGTV 262

Query: 492 SKCFQAENQYAAATSLTHQLQMLV 563
            K    EN +A       QL  LV
Sbjct: 263 HKEIWGENNHAHIIKELAQLASLV 286


>02_02_0704 +
           13095449-13095584,13095671-13095990,13096102-13096423,
           13096556-13096632,13096744-13097127
          Length = 412

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 243 GQINKFEKQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECK 398
           G    FEK+++A L     T A  S +      K   D TEK + T K+  K
Sbjct: 168 GAFQPFEKEKRAELPASSTTAAASSTVVGDSGDKPTDDDTEKHMETDKDNDK 219


>05_01_0537 + 4640251-4640260,4640445-4640918,4641272-4641375
          Length = 195

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +3

Query: 336 EKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQI 464
           EKKD + +T K++   +E+C+Q+  D R + +    + N + I
Sbjct: 6   EKKDFMVKTVKTIKPFEEDCEQLLKDARDAHQRTGCIVNVLAI 48


>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
            3242494-3242836,3244138-3248540,3248928-3249107,
            3249108-3250892,3251055-3252173
          Length = 2727

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +3

Query: 381  SKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLES 494
            S++E K +  D  +  E  +++END   LQN+++ L++
Sbjct: 938  SQKEAKTLAHDLERLSEQLTEVENDRLDLQNISRELKN 975


>03_01_0269 +
           2080338-2080508,2081086-2081335,2081432-2082648,
           2082933-2083083,2083247-2083563
          Length = 701

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -2

Query: 141 YKLSRYQHFKLLNFLAKLLWNXKRPARKTIIKILKEFPIV 22
           YKL  + HF+ ++   + LW+      KTI +I KEF ++
Sbjct: 186 YKLGGF-HFEAISSYRRALWSNWNLDEKTIGRIQKEFAVL 224


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,154,889
Number of Sequences: 37544
Number of extensions: 217065
Number of successful extensions: 638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)