Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP09_F_K23
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 38 0.012
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 32 0.44
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 32 0.44
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 32 0.58
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 32 0.58
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 30 1.8
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 30 1.8
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 30 1.8
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 30 1.8
Z68107-2|CAE17826.1| 170|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 29 5.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 29 5.4
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 29 5.4
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 29 5.4
Z78200-4|CAB01582.1| 289|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z77658-9|CAE17786.2| 201|Caenorhabditis elegans Hypothetical pr... 28 7.2
U39854-3|AAA81078.2| 263|Caenorhabditis elegans Hypothetical pr... 28 7.2
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 28 9.5
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/71 (22%), Positives = 40/71 (56%)
Frame = +3
Query: 249 INKFEKQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYRKSM 428
+NK K + ++ K +KK + KD +++T++ + +KEE +++ +++K +
Sbjct: 696 LNKVRKAEDTLAKIENKYKKESEEVKKTGKNKDKVEKTKEEVEKAKEEFQKVKEEFQKEV 755
Query: 429 ETCSKLENDMQ 461
E K+E +++
Sbjct: 756 EKVKKVEKELE 766
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 264 KQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECK----QICIDYRKSME 431
+Q KA L T D ++ K +LL Q E SK EC+ QI R+ ME
Sbjct: 211 QQEKATL----NTSVEDLKLRTEEWKHNLLGQFEVLTANSKRECESKEEQIANHKREIME 266
Query: 432 TCSKLENDMQILQNVNKGLE 491
SK+E M+++QN + E
Sbjct: 267 KDSKIECLMELIQNSERSAE 286
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +3
Query: 264 KQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECK----QICIDYRKSME 431
+Q KA L T D ++ K +LL Q E SK EC+ QI R+ ME
Sbjct: 211 QQEKATL----NTSVEDLKLRTEEWKHNLLGQFEVLTANSKRECESKEEQIANHKREIME 266
Query: 432 TCSKLENDMQILQNVNKGLE 491
SK+E M+++QN + E
Sbjct: 267 KDSKIECLMELIQNSERSAE 286
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 156 KPFLKMASTFNESMFDFDLNFLHPTTPSDGQINKFEKQRKAIL--IVKKKTIA----TDS 317
KP +++F+ + D + PTT DG+I K + R+ L +KK I+ D+
Sbjct: 394 KPTTSSSTSFSSAEDDKEAEVSTPTTVDDGEIRKIRRLREGELKSELKKFGISPAGPLDA 453
Query: 318 LIKKYYEKKDLLDQ 359
++ YEKK L+++
Sbjct: 454 RTRRLYEKKLLIER 467
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 31.9 bits (69), Expect = 0.58
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 156 KPFLKMASTFNESMFDFDLNFLHPTTPSDGQINKFEKQRKAIL--IVKKKTIA----TDS 317
KP +++F+ + D + PTT DG+I K + R+ L +KK I+ D+
Sbjct: 394 KPTTSSSTSFSSAEDDKEAEVSTPTTVDDGEIRKIRRLREGELKSELKKFGISPAGPLDA 453
Query: 318 LIKKYYEKKDLLDQ 359
++ YEKK L+++
Sbjct: 454 RTRRLYEKKLLIER 467
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 QINKFEKQRKAILIVKK--KTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYR 419
++N + ++++ K ++ +++ L++K Y KKD+L KSLL S EC+ I Y
Sbjct: 501 KLNNYHALNHFLMLIAKVLRSQSSEDLLRKCYHKKDVLIGGIKSLLDS-IECQMIDYTYH 559
Query: 420 K 422
+
Sbjct: 560 E 560
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 QINKFEKQRKAILIVKK--KTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYR 419
++N + ++++ K ++ +++ L++K Y KKD+L KSLL S EC+ I Y
Sbjct: 501 KLNNYHALNHFLMLIAKVLRSQSSEDLLRKCYHKKDVLIGGIKSLLDS-IECQMIDYTYH 559
Query: 420 K 422
+
Sbjct: 560 E 560
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 360 TEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAENQYAAATSL 539
++K+ + +K C ++ + R + E +K+E +M+ LQN LE + Q + + +
Sbjct: 413 SDKARMIAKN-CAELQSNLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNA 471
Query: 540 THQLQMLVKEQ 572
T ++ L+K++
Sbjct: 472 TAGMKDLLKKE 482
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 360 TEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAENQYAAATSL 539
++K+ + +K C ++ + R + E +K+E +M+ LQN LE + Q + + +
Sbjct: 399 SDKARMIAKN-CAELQSNLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNA 457
Query: 540 THQLQMLVKEQ 572
T ++ L+K++
Sbjct: 458 TAGMKDLLKKE 468
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +3
Query: 336 EKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAEN 515
E+ + ++ + S+++ +Q+ D C + E+D L+ N+ L+ + AEN
Sbjct: 1754 EEASANELAQEKVRKSQQQLEQMTADLAMERSVCERTESDKIALERANRDLKQQLQDAEN 1813
Query: 516 QYAA 527
A
Sbjct: 1814 TAVA 1817
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +3
Query: 336 EKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAEN 515
E+ + ++ + S+++ +Q+ D C + E+D L+ N+ L+ + AEN
Sbjct: 1754 EEASANELAQEKVRKSQQQLEQMTADLAMERSVCERTESDKIALERANRDLKQQLQDAEN 1813
Query: 516 QYAA 527
A
Sbjct: 1814 TAVA 1817
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/71 (23%), Positives = 39/71 (54%)
Frame = +3
Query: 360 TEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAENQYAAATSL 539
++K+ + +K C ++ + R + E +K+E +M+ LQN LE + Q + + +
Sbjct: 399 SDKARMIAKN-CAELQSNLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNA 457
Query: 540 THQLQMLVKEQ 572
T ++ L+K++
Sbjct: 458 TAGMKDLLKKE 468
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/64 (21%), Positives = 30/64 (46%)
Frame = +3
Query: 336 EKKDLLDQTEKSLLTSKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAEN 515
E+ + ++ + S+++ +Q+ D C + E+D L+ N+ L+ + AEN
Sbjct: 1754 EEASANELAQEKVRKSQQQLEQMTADLAMERSVCERTESDKIALERANRDLKQQLQDAEN 1813
Query: 516 QYAA 527
A
Sbjct: 1814 TAVA 1817
>Z68107-2|CAE17826.1| 170|Caenorhabditis elegans Hypothetical
protein F48C5.2 protein.
Length = 170
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 342 KDLLDQTEKSLLTSKEECKQICIDYR 419
K L DQT + L S+EEC+Q C Y+
Sbjct: 103 KILGDQTNRVELRSEEECRQYCTAYQ 128
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 246 QINKFEKQRKAILIVKKKTIATDSLIKKYYEKK-DLLDQTEKSLLTSKEECK 398
Q+NK KQ+K + K++ + T + Y + DL + +++L T E+ K
Sbjct: 1169 QLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIK 1220
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 246 QINKFEKQRKAILIVKKKTIATDSLIKKYYEKK-DLLDQTEKSLLTSKEECK 398
Q+NK KQ+K + K++ + T + Y + DL + +++L T E+ K
Sbjct: 1169 QLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLNESDQQTLATLTEQIK 1220
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 381 SKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAEN 515
+KEE Q ID + MET +++E +Q +E KC Q E+
Sbjct: 608 TKEEELQTYID-KNDMETLTEIETKNVRIQTPQPVIEQKCIQTED 651
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 381 SKEECKQICIDYRKSMETCSKLENDMQILQNVNKGLESKCFQAEN 515
+KEE Q ID + MET +++E +Q +E KC Q E+
Sbjct: 608 TKEEELQTYID-KNDMETLTEIETKNVRIQTPQPVIEQKCIQTED 651
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 7420 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 7454
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 8194 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 8228
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 9238 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 9272
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 9957 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 9991
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 7465 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 7499
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 8239 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 8273
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 9283 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 9317
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 10002 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 10036
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 7465 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 7499
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 8239 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 8273
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 9283 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 9317
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 213 NFLHPTTPSDGQINKFEKQRKAILIVKKKTIATDS 317
N+++P T SDGQ+ + ++ I+ K + TD+
Sbjct: 10002 NYIYPVTSSDGQVLPTDAEKPVIVDQSGKPLPTDA 10036
>Z78200-4|CAB01582.1| 289|Caenorhabditis elegans Hypothetical
protein T04H1.5 protein.
Length = 289
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Frame = +3
Query: 273 KAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQIC--IDYR--KSMETCS 440
+A++ K+ A + Y K+ LD K L+ C+++C +D+R K + + S
Sbjct: 132 EAVMQKMKEQAAKHEELIDDYSKRRKLDANSKQLVKDIRSCRKVCEELDHRIGKKVPSVS 191
Query: 441 KLENDMQILQNVNKGLESKCFQAENQYAAATSL 539
++ Q K + + +Y + L
Sbjct: 192 WFWRSYKVAQEETTSYHKKVEKEDEEYKYSNGL 224
>Z77658-9|CAE17786.2| 201|Caenorhabditis elegans Hypothetical
protein F14D7.9 protein.
Length = 201
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = -1
Query: 502 KHLLSSPLLTFCKICISFSNLEQVSIDFL*SIHICLHSSFDVRRLFSVWSNRSFFS*YFF 323
K L+ L F K S + + + F S+HI + FD ++W+ S + Y
Sbjct: 65 KGLIKLVSLNFKKYIFDHSKISRDILHFATSMHIT-NGDFDA---INIWTQTSLYVDYCS 120
Query: 322 IRESVAIVFFLTI 284
S++++FFL++
Sbjct: 121 NFLSLSVIFFLSL 133
>U39854-3|AAA81078.2| 263|Caenorhabditis elegans Hypothetical
protein W06B11.1 protein.
Length = 263
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 294 KKTIATDSLIKKYYEKKDLLDQTEKSLLTS 383
K + A ++KYY++KDL+ Q+ K L S
Sbjct: 149 KPSAALQQFLEKYYDRKDLVWQSNKYALCS 178
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 261 EKQRKAILIVKKKTIATDSLIKKYYEKKDLLDQTEKSLLTSKEECKQICIDYR--KSMET 434
E+++K I KK +KK ++ + + LT E ++ICI + + E
Sbjct: 346 EREKKERDIAKKAMSQQRKRLKKLADEAGHWTENPRDKLTEMERIERICIGFTVDQLREL 405
Query: 435 CSKLEN 452
C K+E+
Sbjct: 406 CEKVES 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,335,880
Number of Sequences: 27780
Number of extensions: 233634
Number of successful extensions: 810
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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